KEGG   Panicum virgatum (switchgrass): 120641838
Entry
120641838         CDS       T07260                                 
Name
(RefSeq) cyclin-T1-2-like isoform X1
  KO
K15188  cyclin T
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    120641838
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pvir03021]
    120641838
Transcription machinery [BR:pvir03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     120641838
    Brd4/P-TEFb complex
     120641838
    7SK RNP complex
     120641838
SSDB
Motif
Pfam: Cyclin_N CycT2-like_C Cyclin_C_2 TFIIB Cyclin_C
Other DBs
NCBI-GeneID: 120641838
NCBI-ProteinID: XP_039774045
LinkDB
Position
7K:complement(47998712..48004673)
AA seq 576 aa
MLSLKSKKSAEFLCQAFVGMFNNLFSISNLTLQKLGCNLLLQLKKSLTYIDGSSCEITNP
PTVATVCVFLASKAEDTPCPLDHVVRVAYETMYRRDTAAAQRIRQKDVFEKQKALILIGE
RLVLTTIRFDFNIQHPYRPLFDAMRNLGINQKEVKQVAWNFVNDWLKTTLYLQYKPQYIA
AGSLYLAAKLHNIKLPLHGAHVWWHQFDVAPKPLEAVIQQMMEHAAVKKLMPARPSPVKQ
KEVPCEAKLHISNSPDSVLNQSSLLISSSSPDIGEPSDPMQLDSCQYLTSSHTSDGRVSG
PESNSLSVSAYINVSRKVHDEESLDQASITKHDAGMMSCSNQTSLDAIAAAEGSAECMKQ
DASHCTVNGKILNQASRNWHGGNVNPLPVVISLDAKMDRESTWCVEPLIGSSNHCTDSLI
ADSLCSDQRLAAAASVPINDAPSASPVVVESDSLRAELKNVDVARIKDLLSKRKRQREIQ
ERAIGSDDLSEEAWIERELESGIVTKQEAAASDGLSDEAWIERELEAGIVVGPRNKQAIT
LDCLSEDDWIERELESGIIVEPAYASKKQKLESSCC
NT seq 1731 nt   +upstreamnt  +downstreamnt
atgctgtctttgaaaagcaagaagagtgcagagtttctttgccaagcatttgttggaatg
ttcaacaatctattctccatttccaacttaacattgcaaaaactgggttgcaacttactg
ttacaacttaaaaaaagtttgacatacattgacggatcatcttgtgaaattacgaatcct
ccaacagttgcaactgtatgtgtatttctggcatcgaaagctgaagatactccttgcccc
ctggaccatgtagttcgagtagcctatgagacaatgtataggcgggacactgctgcagct
caaaggatccgccagaaggatgtttttgagaagcagaaagcactaattttgatcggagag
agattggttcttacaactattcgatttgatttcaacattcagcatccttatagaccactt
tttgatgctatgagaaatcttggcatcaatcagaaggaagtgaaacaagtagcatggaac
tttgtgaatgattggcttaaaacaacactgtacctacagtataaaccacagtatattgct
gctggatctctttacctggcggcaaagcttcacaatatcaagctcccgttacatggagcg
catgtctggtggcaccaatttgatgttgcaccgaagcctctggaagctgtcattcaacaa
atgatggagcatgctgctgtgaaaaaactgatgcctgctcgtcccagtccagttaagcaa
aaggaagttccatgtgaagctaaactgcacatatctaacagcccggactctgtgttgaat
caatcaagcttgttaataagcagctcaagtcctgatattggcgagcccagtgacccaatg
cagctggattcctgtcaatacttgacaagcagtcatacaagtgatggtagggtctcaggc
ccggagagcaattcgttgagtgtaagtgcttatataaatgtttctaggaaagtacatgat
gaagagagcttggatcaagcctcaataaccaaacatgacgctgggatgatgtcatgtagt
aatcagacatcattagatgcaattgcagccgcggagggcagtgctgaatgtatgaagcag
gatgcaagccattgcacagtcaatggcaaaatcttgaaccaggcatcaagaaattggcat
ggtggtaacgtgaacccattacctgtggtgatatcactggatgccaagatggacagagaa
agcacttggtgtgtcgaaccattgattggaagctctaatcattgtactgacagtctgatt
gcggatagcttgtgctctgatcagagattggctgctgctgcttcagtcccaattaacgat
gcaccgtctgcatcgccagttgtagtggagtctgattctttgagggcagaacttaaaaat
gttgatgttgccagaataaaggatttattgtcaaagaggaagaggcagagagagatccaa
gagcgagccattggttcagacgacctcagtgaagaagcctggattgagagagagctcgag
tctgggattgttaccaaacaagaagctgctgcctcagatgggctgagtgatgaagcctgg
atcgagagggagctcgaagccggtattgtggttggaccaagaaataagcaggcaattact
ttagattgtttgagtgaagatgattggattgagagggagctcgagtctgggattattgta
gagccagcgtatgccagcaagaaacagaagctagagtcaagctgctgctag

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