KEGG   Panicum virgatum (switchgrass): 120641907
Entry
120641907         CDS       T07260                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U-like protein 1
  KO
K15047  heterogeneous nuclear ribonucleoprotein U-like protein 1
Organism
pvir  Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pvir03041]
    120641907
   03400 DNA repair and recombination proteins [BR:pvir03400]
    120641907
Spliceosome [BR:pvir03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   hnRNP proteins
    120641907
DNA repair and recombination proteins [BR:pvir03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     120641907
SSDB
Motif
Pfam: AAA_33 KTI12 Zeta_toxin AAA_17 NB-ARC
Other DBs
NCBI-GeneID: 120641907
NCBI-ProteinID: XP_039774154
LinkDB
Position
7K:complement(48877308..48880569)
AA seq 704 aa
MASPDDEAAQPPPKRSRRDPEAEKDAAQPPPPPPRVELNPADCDLDFDVGGGGLKGSALH
EGGFAYCWSGARATVGARGGGRYCFGCRIVAEQPVEMDLTAPEERHLCRIGVSRGDDPVG
ALGESDHSFGFGGTGKFSHQRRFANYGVRFGVGDTVVCAVDLDSKPMASIGFARNGQWLG
IAKHFDAGEKGLGLVDAAVRPMQWESALFPHVLLKNVVVEMQFSREDGLEPVDGYEPWAS
AFADGNAVFGPLFEQSECEVMMMVGLPASGKSTWAEKWVKEHPEKRFILLGTNLALEQMK
VPGLLRKNNYGERFDRLMDCATWIFNKLLTRAANTRRNFIIDQTNVYKNARIRKLRPFAN
YHKTAVVVFPPPSELKSRAAKRFDEMGKEVPAEAVNEMTANFVLPLSRDMPDSKEPFNKV
IFTELSRDEAQRNLLEMQRLLPKTGTQSYGNSSNQNASSTYAVTAAPVDTRPRSSMANIH
PPMANSYGSYSGTVPGSAATFSTGVHTVGITTQQQALSSVQRFQSPTGNQHEFHSGYPSD
PNQYRMPSSYPNNPNQYQLHGSYQSTPLPGYGQSTYGSHRNPSPYNPNPYNPEMHQCIQG
PMTNRNLYQAPGSAKAYGVPGYAAANLIGRPHQVPPPNLPAYSSQPVAQWVPNQGSSSSW
SSDSYRPYGQQSDVHYPPCAAPATPPTPWLPHCSAPNHMNQWRS
NT seq 2115 nt   +upstreamnt  +downstreamnt
atggcgtcgccggacgacgaggccgcgcagccaccgccgaagcgttcccggcgcgacccc
gaagcggagaaggacgccgcgcagccgcctccgcctccgccgcgcgtggagctcaacccg
gcggactgcgatctcgacttcgatgtcggcgggggcggcctcaaggggagcgcgctgcac
gagggcgggttcgcctactgctggtcgggcgcgcgcgcgacggtgggcgccaggggcggc
gggaggtactgcttcgggtgcagaatcgtcgccgagcagcccgtggagatggacctcacg
gcccccgaggagcgccacctctgccgcattggcgtctccaggggcgacgatcccgtgggg
gcgctcggggagtccgaccacagcttcgggttcgggggcacggggaagttttcccaccag
cggaggttcgccaactacggcgtcaggttcggggtcggggacacggtcgtctgcgccgtg
gacctcgattcgaagcccatggcgtcgatcgggttcgcgaggaacggccagtggcttggt
atcgcgaagcatttcgatgccggtgagaaggggcttggcttggttgacgcagctgtgagg
ccgatgcaatgggaatcagcgctctttccccatgtcctgctgaagaatgttgtcgtggag
atgcaatttagcagggaggatgggctggagccagttgatggttatgagccctgggcctcg
gcttttgctgatgggaatgctgtatttggacctctgtttgaacagagtgaatgtgaggtc
atgatgatggttggtctcccggcttcaggcaagtcgacatgggcagagaagtgggtcaag
gagcatccggagaaacgttttatccttctcgggactaaccttgcattggagcaaatgaag
gtgccaggattgttgcgtaagaataactatggtgagcgttttgatcggttgatggactgc
gctacatggattttcaacaaattgctgaccagggctgcaaacacccgtcgcaactttatc
attgatcaaacaaatgtttacaagaatgctcgtattcgcaagctgaggccatttgccaac
taccataagactgctgtggtcgtattcccaccgccaagtgaactgaaatccagggcagca
aagcgattcgatgagatgggaaaggaagtgccagctgaagcagttaacgaaatgacagcc
aattttgtcttgccgctctcaagggatatgcctgattcgaaggagccttttaacaaggta
atttttacagagctttctagggatgaggcccagagaaacctacttgagatgcaacgactg
ctgccaaaaaccgggacccaaagctatggcaattccagtaaccaaaatgctagctcgacg
tatgcagtgactgctgctccagttgatactaggccaaggtcatccatggcaaacattcac
cctccaatggccaattcatatggaagttatagtggcacggtacctggaagtgctgctact
ttcagcacaggtgtgcatactgtgggtattacaacacagcaacaggcactgtctagtgtt
cagaggtttcagagtccaacaggaaaccaacatgaatttcattcaggctacccaagtgat
ccgaaccaatatcggatgccctcaagctatccgaataacccaaaccagtatcagttacat
ggaagctaccaaagtaccccacttcctggttatggacagagtacatatggatcccatagg
aacccgagcccatacaatcctaatccttataaccctgagatgcaccaatgcattcagggt
ccaatgactaataggaacctctaccaggcacctgggtcagccaaagcctatggggtccct
ggctatgcagctgcaaatctgattgggaggccacatcaggtgccaccaccaaatcttcca
gcatatagttcacaaccagttgctcagtgggtgccaaatcaaggtagttcttcctcatgg
agttctgacagctacaggccctatggacaacagtctgatgtgcactacccgccgtgtgct
gctccagcaacacctccgactccctggcttcctcactgttccgccccaaaccacatgaat
caatggcggagttag

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