Panicum virgatum (switchgrass): 120641913
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Entry
120641913 CDS
T07260
Name
(RefSeq) probable galacturonosyltransferase 10
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120641913
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120641913
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
120641913
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120641913
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
New_glue
Motif
Other DBs
NCBI-GeneID:
120641913
NCBI-ProteinID:
XP_039774161
LinkDB
All DBs
Position
7K:48881610..48884263
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AA seq
555 aa
AA seq
DB search
MRRRPFLDQRRPSFKRRWQQRPWWVRLALSLLFALACVLLLTVILGSPDPGASPSTSTAS
SGTEATSSPLLRQRSYLEGITDALNMTDEMLSARSFSRQLMDQIYLAKSYVVVAKEANNL
QFAAELSAQVRQAQSILVHAAAHGGTVLEQEAEKAIRDMSVLLFQAQQLRYDSGITIMKL
KGQIQSLEEKSKAEAEKSTKYGQIAAEELPKGLYCLGVRLTMEWFKNSELQRKFSDRSPV
VQNNLRDNSLYHFCVFSDNILAVSVVVNSTATNSKHPEKIVFHLVTDELNYAPMRAWFAM
SDYRGVTVEIQKVEDFTWLNASYVPVLKQLQNTATQKFYFSGSGNRGTPIKFRNPKYLSM
LNHLRFYIPEIYPELQKVVFLDDDIVVQKDLSELFTINLNGNVMGAVETCMETFHRFHKY
LNHSHPLIRAHFDPDACGWAFGMNVLDLVEWRNKNVTGIYHYWQERNADHTLWKLGSLPP
GLLAFYGLVEALDPKWHVLGLGYTTVDPATIKEGAVLHYNGNMKPWLKIGMEKYKSFWDN
YVDYSHPLIQQCFMR
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgaggcggcggccgttcctggaccagcggcggccgtcgttcaagcgccggtggcagcag
cgaccgtggtgggtgcgcctcgcgctctccctcctcttcgccctcgcctgcgtcctcctc
ctcaccgtcatcctcggctcccccgaccccggcgcctcgccgtccacctccaccgcctcc
tccggaaccgaggccacctcctcccctctcctccgtcagagatcttacctggaaggcatc
acggatgcgctcaacatgactgacgaaatgctgagcgctcgctcgttctccaggcagctc
atggaccagatttatctagccaaatcttatgtcgttgtcgcgaaggaggccaataacttg
cagtttgcagcggagcttagtgcccaggtgcggcaggcgcagagcatcctcgtgcacgct
gcagcccacgggggcacggtgctggagcaggaagcagagaaggcgatcagggatatgtct
gtgctgctcttccaggcgcagcagctgcggtatgacagcggcatcacaatcatgaagttg
aagggacagattcagtctctagaggagaagtcgaaagctgaggcagagaagagcacaaag
tacgggcagattgctgctgaggagcttcctaaggggctctactgccttggtgtccggtta
accatggaatggttcaagaattctgagcttcagaggaagttttctgataggagcccagta
gtgcagaacaacctaagggataacagcctctatcatttttgtgttttctcagacaacatc
cttgctgtttcagttgttgtcaattctacagctacaaactcaaagcaccctgaaaagatt
gtctttcacttagttaccgatgagttgaactatgctccaatgagggcatggtttgccatg
agtgactacagaggggtcactgtggagatacaaaaggtggaggactttacttggctaaat
gcatcatatgttcctgttcttaaacagctgcagaacactgctactcagaagttctacttc
tctggcagtggtaaccgcggaacaccgattaaattcaggaacccaaagtacctgtccatg
cttaaccacttgaggttttacattccagaaatatatcctgaattgcagaaggtggtattt
cttgatgatgatattgttgttcagaaggacttatccgaactgtttactatcaacctcaat
ggtaatgtgatgggtgctgtagaaacttgcatggagacattccacaggtttcataagtat
cttaaccattcccatcctctaatccgtgctcattttgaccctgatgcttgtggctgggca
tttggtatgaatgtgctcgatcttgtcgaatggaggaacaagaatgtgacaggtatatat
cattattggcaggagcgcaatgctgatcataccctatggaagcttgggtctttaccgcct
gggcttcttgctttctatggtttggttgaagcactggatcccaaatggcatgtcttggga
cttggctacactactgtggatcctgctactatcaaggaaggggcagtgctgcattacaat
ggaaatatgaagccatggctcaaaattggaatggagaagtacaagagcttttgggataac
tatgtggactattcacaccctttgattcagcagtgcttcatgcgttga
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