Panicum virgatum (switchgrass): 120641922
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Entry
120641922 CDS
T07260
Name
(RefSeq) transcription factor TGAL6-like isoform X1
KO
K14431
transcription factor TGA
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120641922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120641922
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
Plant bZIP factors
120641922
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Gene cluster
GFIT
Motif
Pfam:
DOG1
bZIP_1
bZIP_2
Motif
Other DBs
NCBI-GeneID:
120641922
NCBI-ProteinID:
XP_039774176
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All DBs
Position
7K:48970561..48978582
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AA seq
404 aa
AA seq
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MMELYPGYLEDHFNLHKLSIGAAASPPEYMTSAPAVQFAAAPIRMGVYERPAPAPVMGMW
NSDPFKVDSGQATSGSTVMEADKFDTRLEDVPQVALEPARSTDQETSRPPERVLRRLAQN
REAARKSRLRKKAYIQQLETSRMKLAQLEQELQRARQQGAYANGNLGDRNLGFTGSMVPG
VAAFEIDYSNWVEEQNRHTAELRSALQGQTTELELRMLVETGLNNYEHLFRIKALAANSD
VFYVTSGVWKTPAERFFLWIGGFRPSEVLKILRPQLEPLTEAQLMAVGGLQHTSTQAEDA
LSQGMEKLQQNLAETLTAAADPFGPPDGYMLQMETAVEKLKELVGFVIQADHLRQTTLQQ
MHKILTTRQAARGLLALGDYFQRLRALSHLWATRPREAPTLSHL
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgatggagctctaccctggataccttgaagatcatttcaaccttcacaagcttagcatc
ggcgccgccgcctccccgccggagtacatgacctctgcgcccgcggtgcagttcgcggcg
gcgcccatcagaatgggggtgtacgagcggccggcgccggcgcccgtgatgggcatgtgg
aacagcgacccgttcaaggtcgacagcggccaggccaccagtgggtccaccgtcatggag
gcggacaagttcgacactaggctagaagatgttccacaggtagcactggagccggcaaga
agtacggatcaggaaacaagcaggccgccagagagggtcctgcgaagacttgcacagaac
agagaggctgctcggaagagccggctgagaaaaaaggcgtacatccagcagctagagaca
agccggatgaagctggcgcagctagagcaagagcttcaacgggctcgacagcagggtgcc
tatgcaaatgggaatttgggagaccgaaatctcggattcacaggatcaatggttccaggt
gttgctgcgttcgagatagactacagcaactgggtggaagagcagaacaggcacacagcc
gagctgaggtccgctctccaggggcagaccacggagctggagctgcgcatgctcgtcgag
accgggctcaacaactacgagcacctgttcaggatcaaggcgctggccgccaactcggac
gtgttctacgtcacgtccggcgtgtggaagacccccgccgagcgcttcttcctgtggatc
ggcgggttccggccgtcggaagtgctcaagatcctgaggccgcagctggagccgctgacg
gaggcgcagctgatggccgtgggcggcctgcagcacacctcgacgcaggccgaggacgcc
ctgtcgcagggcatggagaagctgcagcagaacctcgccgagacgctgacggccgcggcc
gacccgttcggcccccccgacggctacatgctgcagatggagaccgccgtggagaagctg
aaagagctcgtcggcttcgtgatccaggcggaccatctccggcagacgacgctgcagcag
atgcacaagatcctgacgacgcggcaggcggcgaggggcctcctggcgctcggcgactac
ttccagcgcctccgcgcgctcagccatctgtgggcgacgcggccccgcgaggcgccgacg
ctcagccatctgtag
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