Panicum virgatum (switchgrass): 120641942
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Entry
120641942 CDS
T07260
Name
(RefSeq) microtubule-associated protein RP/EB family member 1A-like isoform X1
KO
K10436
microtubule-associated protein, RP/EB family
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120641942
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pvir04812
]
120641942
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
120641942
Cytoskeleton proteins [BR:
pvir04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
EB / APC
120641942
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EB1
CH
CH_2
CAMSAP_CH
Motif
Other DBs
NCBI-GeneID:
120641942
NCBI-ProteinID:
XP_039774212
LinkDB
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Position
7K:49178751..49181681
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AA seq
271 aa
AA seq
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MAVAAAVSSIGIMDGAYFVGRGEILHWINATLQLSLAKVEEAASGAVQCQLMDMVHPGVV
PMHKVNFDAKTEYEMIQNYKVLQDVFNKLRIVKNIEVNKLVKGRPLDNLEFLQWLKRYCD
SVNGGIMNENYNPVERRSKGCKERGSKGSNKSSKSLQANRLSGGDSADGGPGVGKVCNTF
AEEHYIEQIQQLSEKIAGLKVSVDSMEKERDFYFSKLRDIEILCQRPELEHLPMTKAVRK
ILYAADAKDSPLPDANDIITKSPGLFTDEAE
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atggcggttgcggcggcggtgtcgagcatcgggatcatggacggcgcctacttcgtgggg
aggggcgagatcctgcactggatcaatgccaccctccagctctccctcgccaaggtcgag
gaggctgcgtcgggggcggtgcagtgccagctgatggatatggttcatcccggagtggtg
ccgatgcataaggttaactttgatgcgaagactgaatatgagatgattcagaactacaag
gttcttcaggatgtgttcaacaagctgcgcatagtcaagaatattgaggtcaacaagctt
gtaaaaggacgcccattggataacttggaatttcttcagtggttgaaaagatattgtgat
tctgttaatggtggaattatgaatgaaaactacaatcctgtagaaaggagatccaaggga
tgcaaagaacgtggttcaaagggttccaataagtcatctaaatcattgcaggccaataga
ctttctggtggtgattcagccgatggaggccctggagttggaaaagtatgtaacactttt
gctgaagagcattacatagaacagattcagcagctgtctgaaaagatcgcaggcctgaaa
gtttctgtggacagcatggagaaagaaagagatttctacttctcgaagcttcgtgatatt
gagatactgtgtcaacgacctgagttggagcatctaccaatgactaaagctgttcggaag
atactttatgcggctgatgcaaaggattcaccactacctgatgcgaatgatataatcacc
aagtcaccgggcttgttcacagacgaagctgaatga
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