Panicum virgatum (switchgrass): 120641966 Help Entry 120641966         CDS       T07260                                  Name (RefSeq) protein TSS-like   KO K03255   protein TIF31 Organism pvir  Panicum virgatum (switchgrass) Brite KEGG Orthology (KO) [BR:pvir00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03012 Translation factors [BR:pvir03012]     120641966 Translation factors [BR:pvir03012]  Eukaryotic type   Initiation factors    Initiation associated factors     120641966 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TPR_12 eIF3_p135 TPR_10 TPR_NPHP3 CLU_N TPR_2 PAM2 TPR_9 TPR_MalT TPR_8 CLU PTPRCAP TPR_1 Motif Other DBs NCBI-GeneID:  120641966 NCBI-ProteinID:  XP_039774252 LinkDB All DBs Position 7K:49439673..49458283 Genome browser AA seq 1723 aa AA seqDB search MAPKAGRGKGRGGGGGKGDKRKKEEKVVPSVVDVTVVTPYESQVTLKGISTDRVLDVRKL LGSNVETCHLTNYSLSHVARGPRLEDGVEIVALKPCTLRIVEEEYATEQQAVAHVRRLLD IVACTTAFAKPRDGAAKHKSSKHGRPATPPSPPAPASTGANGGGSTGEGAPPISEAHDMA AIRPPPKLGEFYDFFSFAHLTPPVHFIRRKEANGASQEGDYFEIEVKVCNGKLLHVVASV KGFYLAGKPHNVSHSLVDLLQQLSNAFANAYEALMKAFVDHNKFGNLPYGFRANTWLIPP IYVDPATKCPALPVEDENWGGNGGGNGRDGKYDIRRWSKDFSVLARMPCKTEEERVIRDR KTFLLHNLFVDTAIFRAASTIRRLVNQSMNSTGAHSGMPGSNIFEERVGDMHITVKKDGA DASLKLEDKVDGVAFCPTGAMDITQRNILKGLTSDESVVVKDSSMLGVVIVKHCGYTATV KVSERAKDSNDVKQTYDTSDNLDGVLNIDVDDHPDGGSNALNINSLRIPLPRIINPETAV GNQYPSPKSHASNPARKLARTVLEDSLRKMDSMPNKNPRIIRWELGSSWLQHLQKKDSPK SDNGKENKIKADKEPAVKGLGKHFEQLRKIKKKECNIEGSGSEKEESNSNCSPVNGMLES DKIAVDETIKGADISKLMSEDAFFRLKNLGAGLHEKSLEELTEMAHNFYDDTALPKLVSD FASLELSPVDGRTMTDFMHTRGLNMSSLGRVVELAEKLPHIQSICIHEMVIRSFKHVIRA VIAAVDDMQNMSAAIAETLNILLGSPRLENGADTDAHIEHNLRLKWVESFLSKRFNWKLK DEFAHLRKFIILRGLCSKVGLELVAKDYNMNSPNPFDKSDIISIVPVCKHVVYSSIDGRN LLESSKVALDKGKLDDAVSYGTKALSKIIAVCGPYHRLTANAYSLLAVVLYHTGDFNQAT IYQQKALDINERELGLDHPETMKSYGDLSVFYYRLQHIEMALKYVNRALYLLQFSCGLSH PNSAATYINVAMMEEGMGNVHVALRYLHEALKCNKRLLGADHIQTAASYHAIAIALSMMD AYSLSVQHEQTTLQILQEKLGQDDLRTQDAAAWLEYFESKALEQQEAARRGMPKPDSSIA SKGHLSVSDLLDFISPDQERKERDMQRKCRRAKNNIRAQHGESVEEKENFKLDSGSSLEA TKDVFQEQKLDAHPPVVLEENYAAHDEQKQSDVLSPEEYSDEGWQAASLTGRSANIRRKC SRRKPALTKLMVDRFEDGQTGSVYRSGFKPQTKGDKEDAASAPSQLSFGSFLKTDKLNGD TNIVEEKSCNTTAKPEQQAKPTGINRPTSIASKFVSYKDVAVSPPGTVLKPILEKNEEKE KENKHDADVTLSSEEEDRKFTEKEKEKPNDDSSKDVLSSQPDGIGQQETPPDSNSDDSPS ELKKASGSKLSASAPPFNPGSLLSMSHPYSTVAIYDASAVLQAIPSQAMEIPPHAIDTRV PRGPRSTLYYRTGHSFQRKQGYTHSQSTVVRGSYSPTTMNPHAAEFVPGKTVQQSDVADR EPSPANPVTDSDQDVVSQITDEVKAETFTAEKAGQIEKVVSGKGKENRGKDILRNSYKTE LARQILLSFIVKSVHDSLGSTAAVPDRKPSGSDEANNEQGSNISKNASGRQDSDKQQKAM EVPKGLKDTEGFTMVLKRRRRPQPFMNPINGLYSQQSICTSVS NT seq 5172 nt NT seq  +upstreamnt  +downstreamnt atggcccccaaggccggccgtggcaagggcaggggcggcggcggcggcaaaggcgacaag aggaagaaggaggagaaagttgtgcccagcgtggtagacgtcacggtcgtcaccccctac gaatcccaggtgacactcaagggcatatccacggaccgtgttctggacgtgcggaagctg ctggggtccaacgtggagacgtgtcacctgacaaactattcactctcccatgtggcacgc gggccgcggctggaggacggcgtggaaatcgttgcgctcaagccctgcacgctccggatc gtggaagaggagtacgcgacagagcagcaggcggtggcgcacgtccgccggctgctggac atcgtcgcctgcaccaccgcgttcgccaagccccgggacggcgccgccaagcacaagtcg tccaagcacgggcgccccgcgacgccgccctccccgcccgcgcccgcctccactggggcc aatggcggcggcagcactggcgagggcgcgccgccgatatcggaggcgcacgacatggcg gccatccgcccgccgccgaagctgggggagttctacgacttcttctccttcgcccacctc accccgcccgtccactttatcaggaggaaggaggcgaatggcgcttctcaggaaggcgat tacttcgaaatcgaggtgaaggtttgcaacggcaagcttctgcatgtagttgcttcagta aagggtttctacttggcagggaagccgcacaacgtaagccactccctggtggacctactg cagcagctcagcaatgcatttgcaaatgcatacgaggcattaatgaaagcttttgtggat cacaacaagtttgggaatttgccgtatggattccgtgcaaacacatggcttatccctcca atatatgttgaccctgctacgaagtgtccagcactgccagtcgaggatgagaattggggt ggtaatgggggtggcaatggacgcgacggaaaatatgacatcagacggtggtcaaaagac ttttctgttttggcaagaatgccatgcaaaactgaggaagagcgggtgatccgggaccgg aaaacttttcttttacacaatctgtttgtagatacagcaatttttagagctgcatcaaca ataaggcgtctcgttaatcagtctatgaactcaactggtgcgcatagtggtatgcctggt tcaaacatatttgaggaacgtgtcggggacatgcatataactgtgaagaaggatggggct gatgctagtctgaagctggaggacaaggttgatggtgttgccttctgtccaacgggggct atggatatcacacaaagaaatattctgaaaggtttgacttctgatgaaagtgttgttgtt aaggattcttcaatgctaggagtggtgattgtcaagcattgtggatatacagcaactgtg aaggtttctgaacgcgcaaaggatagtaatgatgttaaacaaacctatgatacctctgat aatcttgatggagtgctgaacattgatgtggatgaccatccggatggaggttcaaatgcc ttgaatatcaacagtttaagaataccactcccgagaattatcaatccagaaacagctgtt ggtaaccagtatccgagcccaaagtctcatgctagtaatcctgcacggaaactggcacgc acagtacttgaggacagcttgagaaagatggatagcatgcctaacaaaaatcctagaatt atcagatgggaacttggatcctcctggctgcagcacttgcagaaaaaggattctccaaag tctgataatggtaaggaaaacaaaataaaggctgacaaagaaccagctgtcaaaggtctt ggaaagcattttgaacaattaaggaaaataaaaaagaaagaatgcaacattgaaggttct ggttctgagaaggaagaatctaacagtaattgttcaccagtgaatggtatgctagaatca gataagatagctgttgatgaaaccattaagggggctgatataagcaagctaatgtcagag gatgctttctttcggttgaagaatttgggagctggccttcatgaaaagtcccttgaagaa ctcacagagatggcccataatttctatgatgatactgcactcccaaagctggtgtctgat tttgcatcccttgaactttctccggtcgatggaagaaccatgacagatttcatgcataca aggggacttaacatgtcctccttgggtcgtgtggtagagctagcagagaagctcccacat atccagtctatatgcattcatgagatggtcattaggtcgtttaagcatgtcatcagagct gttattgctgctgttgatgacatgcaaaatatgtctgcagctatagctgagactctaaac atattactaggatcccccagacttgaaaatggtgctgatacggatgcacatatcgagcat aatttgcgattgaaatgggtagagagcttcctttcaaaaagattcaactggaaactgaaa gatgaatttgcacacctgcgaaaatttatcattctgagagggctttgcagcaaggttgga ctagagttggttgcaaaagattacaatatgaatagccctaacccattcgacaagtctgac attatcagcattgttcctgtatgcaagcatgtggtctactcctcaattgatggtcgaaac ttgctggaatcatcgaaggtggcattggataaaggaaaactagacgatgctgtcagctac ggaacaaaggctttgtccaaaattatagctgtctgtggtccataccatcgactgactgct aatgcatacagccttcttgctgttgtcctttatcatactggagattttaatcaggcaact atatatcagcaaaaggcacttgatatcaatgaaagggaacttggtcttgatcatccggaa actatgaagagttatggggatttatctgtcttctactaccgactgcaacacattgaaatg gctttaaagtatgtcaaccgtgcactatatctgcttcaattttcgtgtgggctttcacac ccaaattcagctgccacctacattaatgtggctatgatggaagaaggcatgggaaatgtc catgttgctcttcggtacttgcatgaagccctgaagtgcaacaagagattgctaggagct gatcacatccagactgctgcaagctaccatgccatagccatagccctttcgatgatggac gcatactccctaagcgtgcaacatgaacaaaccaccttgcagatccttcaggagaaacta gggcaagatgacctccgaactcaggatgctgctgcatggctagagtatttcgagtcaaaa gcattagaacaacaagaggctgctcggagaggaatgccaaaacctgattcatctattgct agtaaaggacatcttagcgtatcagatcttcttgacttcattagtccggaccaagaaagg aaagagagggatatgcaaaggaaatgcaggcgtgcaaagaataatatcagagcccaacat ggtgaatcagttgaagaaaaggagaacttcaagcttgattcaggatcttctcttgaagca accaaagatgtatttcaagaacaaaaactggacgcgcatcctcctgtggtattagaagaa aattacgctgcccatgatgagcagaagcaatccgatgttttgtcacctgaagaatattct gatgaagggtggcaagcagctagtttgaccgggcgatctgcaaatataaggaggaaatgc agtcgcaggaagccagctctcacaaaattaatggttgatcgcttcgaagatggtcagaca ggttctgtttataggagtggtttcaagccgcaaacaaagggagacaaagaagatgctgca agtgctcctagccaactctcctttggtagctttttaaaaaccgacaagttgaatggggat accaacattgttgaagagaagtcttgcaatactacggctaaaccagaacagcaagcaaaa cccacaggaattaacaggccaactagtattgcttccaagtttgtatcatacaaagatgtg gctgtttcgccccctggcacggtattgaagccaattttggagaagaacgaagaaaaggag aaagaaaacaaacatgatgctgatgtaacactgtcgtccgaggaagaggacagaaaattt acagaaaaagagaaggaaaagccaaatgatgatagcagcaaagatgttctttcaagtcag ccagacggaatcggtcagcaagaaacacctcctgacagcaacagcgacgatagcccctca gaacttaagaaagcatctggaagcaaactgtctgcttcagcacctccattcaatccggga tcacttttatcaatgtcacacccatacagcacagtggcaatatatgatgctagtgctgtc cttcaggcaataccaagccaagcaatggagattcctcctcatgccattgatactagagtg cctcgtggtcctcggtccaccttgtactatcgtactgggcattctttccaaaggaaacaa ggttacacacacagccagagcactgttgtaaggggtagctactcccccacgaccatgaat ccccatgctgctgagtttgtgcctggaaaaactgttcagcaatctgatgtggctgacaga gaacccagtcctgctaatcctgtgactgattctgaccaggatgtggtttcacagatcaca gatgaagtaaaggctgaaacgttcaccgcagaaaaggcaggtcaaattgagaaagtcgtt tcaggtaaaggaaaggaaaacagagggaaagacatcttaagaaattcgtacaaaacagaa cttgcaaggcaaattttgctcagtttcattgtgaagtcggtgcatgatagtttaggttcc actgctgctgtaccagacagaaaaccaagtggttcagatgaagccaataatgaacagggc agcaacataagcaagaacgcatctggtcggcaagattctgataaacaacagaaagccatg gaggtgcctaaaggtctgaaggatacagagggatttacaatggttttaaaacgtcgaagg aggccacagccattcatgaaccccataaatggtctctattctcagcagtctatttgcact tctgtcagttaa

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