Panicum virgatum (switchgrass): 120642002
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Entry
120642002 CDS
T07260
Name
(RefSeq) D-3-phosphoglycerate dehydrogenase 3, chloroplastic-like
KO
K00058
D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:
1.1.1.95
1.1.1.399
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00260
Glycine, serine and threonine metabolism
pvir00270
Cysteine and methionine metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01200
Carbon metabolism
pvir01230
Biosynthesis of amino acids
Module
pvir_M00020
Serine biosynthesis, glycerate-3P => serine
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
120642002
00270 Cysteine and methionine metabolism
120642002
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120642002
Enzymes [BR:
pvir01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.95 phosphoglycerate dehydrogenase
120642002
1.1.1.399 2-oxoglutarate reductase
120642002
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120642002
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Paralog
Gene cluster
GFIT
Motif
Pfam:
2-Hacid_dh_C
2-Hacid_dh
PGDH_inter
ACT
KARI_N
AdoHcyase_NAD
NAD_binding_2
F420_oxidored
XdhC_C
UDPG_MGDP_dh_C
ELFV_dehydrog
ACT_AHAS_ss
Motif
Other DBs
NCBI-GeneID:
120642002
NCBI-ProteinID:
XP_039774305
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Position
7K:49852103..49855180
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AA seq
619 aa
AA seq
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MAAPTPTAAAAATTHHRILLPSPSPSPRGALAPAFLRLPHREQAHARAQRARLPAPLAAA
ASTASPEAPASGAVPGKPTVLVAEKLGAAGLALLREFANVDCSYGLSPEELRAKISLCDA
LIVRSGTKVGRDVFEASGGRLRVVGRAGVGIDNVDLAAATEHGCLVVNAPTANTVAAAEH
GIALLTAMARNIAQADASLKAGKWLRNKYVGVSLVGKTLAILGFGKVGSEVARRAKGLGM
HVVAHDPYASADRARAIGVELVSMEEAMTTADFISLHMPLTPATNKMLNDEAFAKMKKGV
RIINVARGGVIDEEALVRALDSGIVAQAALDVFTKEPPAPDNKLVLHENVTVTPHLGAST
VEAQEGVAIEIAEAVIGALKGELAASAVNAPMVPAEVLSELAPFVVLAEKLGRLAVQLVA
GGGGIKSVKVTYASARAPDDLDTRLLRAMITKGLIEPISSVFVNLVNADFTAKQRGVRIT
EERILLDGSPETPIEYIQVHIANVESKFPSAISETGEITVEGRVKDGVPHLTKVGAFQVD
VSLEGSLILCRQVDQPGMIGAVGSVLGEENVNVSFMSVGRIAPRKHAVMAIGVDEEPSKS
TLAKIGEIPAIEEFVFLKL
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccgaccccgaccgccgccgccgccgccaccacccaccaccgcatcctcctc
ccgtccccgtccccgtccccgcgcggcgccctcgcgcctgccttcctccgcctgccccac
cgcgagcaggcccacgcccgcgcccagcgcgcgcgcctccccgcgcccctcgcggccgcg
gcctccaccgcatcccccgaggcgccggcctcgggggccgtcccggggaagcccacggtg
ctcgtcgccgagaagctcggcgccgcggggctcgcgctgctgcgcgagttcgccaacgtc
gactgctcctacggcctctcccccgaggagctccgcgccaagatctcgctctgcgacgcg
ctcatcgtcaggtccgggaccaaggtcggccgcgacgtcttcgaggcctccgggggcagg
ctccgcgtcgtcggccgcgcgggggtcgggatcgacaacgtcgacctcgccgccgccacc
gagcacggctgcctcgtcgtcaacgcgcccaccgcaaacaccgtcgccgccgcggagcat
ggcatcgcgctgctcaccgccatggcgaggaacatcgcgcaggccgacgcgtccctcaag
gctggtaaatggctgcgcaacaagtatgttggggtatctcttgtgggcaaaactcttgct
attcttggattcggaaaggttgggtcagaagttgcacgtcgtgctaaaggtttaggaatg
cacgtggttgcacacgatccatatgcttcagctgaccgggctcgtgcaattggagttgag
ctagtcagcatggaagaggccatgacaactgctgacttcatctcattgcacatgcctctt
acccctgcaacaaacaagatgctcaacgatgaggccttcgctaagatgaagaagggtgtt
cgcattattaatgttgctcgcggtggtgtcattgatgaagaagctctagtcagggctctt
gattcaggaatagtagcacaggctgctcttgatgtgttcactaaagagccaccagcacct
gataacaagctggtgctgcacgagaatgttactgtcacaccgcacctgggtgccagcaca
gtggaagcacaggaaggagtggctattgagatagctgaagctgtcattggagctctgaaa
ggggagcttgcagcttctgcagtcaatgctccaatggttcctgctgaggtactgtcagag
cttgcaccttttgttgtgcttgcagaaaagcttggacgccttgctgttcaattggttgct
ggcggtggcggtatcaagtctgttaaggtgacctatgcgtctgcacgggctcctgatgat
cttgacacaagacttctccgtgcaatgatcaccaaggggttgattgaaccaatatccagt
gtttttgtcaacctggtaaatgctgatttcaccgcaaagcagaggggagttcggatcact
gaggagagaatcttgttggatggctcacctgagacgcctattgaatacattcaagttcat
atcgccaatgtcgagtccaaatttcccagtgccatatccgagactggagagatcactgta
gaggggagggtgaaggatggtgtccctcatctaacaaaggttggagcattccaggtagat
gtgagcttggaaggaagcctgatcctctgcaggcaggtcgatcagcctggcatgatcggg
gcagtaggaagtgtcctgggtgaggagaatgtcaatgtcagtttcatgagtgttggaaga
atcgctcctcgcaagcatgctgtcatggcaatcggggttgatgaagaaccaagcaagagc
acgctggcaaagattggggagattcctgcaatcgaagagtttgttttcctcaagctctag
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