Panicum virgatum (switchgrass): 120642120 Help Entry 120642120         CDS       T07260                                  Name (RefSeq) HBS1-like protein isoform X1   KO K14416   elongation factor 1 alpha-like protein Organism pvir  Panicum virgatum (switchgrass) Pathway pvir03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:pvir00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     120642120  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pvir03019]     120642120 Messenger RNA biogenesis [BR:pvir03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      120642120 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 GTP_EFTU_D4 Zn_ribbon_RanBP Vps36-NZF-N Zn_Ribbon_TF zf-Sec23_Sec24 Motif Other DBs NCBI-GeneID:  120642120 NCBI-ProteinID:  XP_039774459 LinkDB All DBs Position 7K:complement(51734488..51739530) Genome browser AA seq 684 aa AA seqDB search MFVPMLDNRSDLEKPFTDPGMWQCSICTHENDTGNLSCELCGVLRDLSLYFNNTSEAEAG AKRRNKYSGVSVLARSLFTTSNTKSKAIIFSDGSQENTNATENKQATMDALHKTYMPSKK RHSNIVPFKFDTPSPDDMVTTGLKSSINLRKEVQIKDSVDATGKKLMDSGILQTEKDTSM DPSTSAGVDKLGGTSSSVLSSNQHVTPILDHELQHLSLESKPKSSKPKIKKPASISEYKP EPWMLQSDDQEIRRQINLAVVGHVDSGKSTLCGRLLHALGLISKKQMHKYEKEAKEKGKG SFAYAWAMDEGPDERERGITMTVAVKYFDTEKYHVVLLDSPGHKDFVPNMISGATQADAA VLVVDASIGSFEAGMGVNGIGQTKEHSQLIRSFGVENLIVAVNKMDMVEYSKDRFNFVKS QLGIFLRSCGFKDSSITWVPLSAMANENLMTTASDSRLLSWYNGNCLLKSIDSLPPPQRD VSRPLRLPICDVIASITLGQMAFCGKVEAGGIRTGSKVLVMPSGDLATVKTIERDSSSCN LARAGDNIAVGLQGMDPSHLVSGGVICHPDFPVHVASRLELKILVLEITTPILVGLQFEL HIHHARVSASLVKILSLLDQKTGKASKKMPRLLTTRQAAVVEVKLDKEVCVEEFSALKAL GRVFLRSRGNTVAVGIVTRILDEA NT seq 2055 nt NT seq  +upstreamnt  +downstreamnt atgtttgttcccatgttagataacaggtctgatcttgagaagccctttacagatcctggg atgtggcaatgctcaatttgcactcatgaaaatgatacgggtaatttatcctgtgagcta tgcggtgtacttcgtgatctgtcgctgtatttcaataataccagtgaagctgaagctgga gctaagcgcagaaacaaatattctggagtatctgtactggcaagatctctttttacaaca tctaatacaaagtcaaaggctattattttctctgatggctcccaagagaatacaaatgca acagagaataagcaagctaccatggatgctctgcataagacatacatgcccagcaaaaag cgccacagtaacatagtgcccttcaagtttgatacgccatctcctgatgacatggttact acaggcttaaaatcatcaataaatcttagaaaagaggttcaaataaaagattcagttgat gccaccggaaagaagttaatggatagtggtattcttcaaactgaaaaggatacaagtatg gatccaagtacatcagctggggtggataaacttggcggaactagtagcagtgttctttcc agtaatcaacatgtaactcctattttggaccatgagctacagcatttgagtttggagagc aagccgaagagcagtaaacccaagattaagaaaccagcttctatttcagagtacaagcca gaaccatggatgctccagagtgacgatcaagaaatacgtagacaaataaatcttgccgtt gttggtcatgttgattctgggaaatcaactttatgcggtcgattactacatgctctggga ttgatttcaaaaaagcaaatgcataaatatgagaaagaagctaaagaaaaggggaaagga tcatttgcatatgcttgggccatggatgagggccctgatgagagggagcgtggaattaca atgactgtggctgtgaaatactttgacactgaaaaataccatgtagttttgctcgactcc cctggtcataaagattttgttcctaatatgatatctggtgctacacaagctgatgcagct gtcctagttgttgatgcatccataggctcatttgaagcaggcatgggtgttaatgggatt ggtcagacaaaggagcactcacaacttattaggagctttggtgttgagaacttgatagtt gctgttaataagatggatatggtggaatattcgaaagaccggtttaattttgttaaatcg caacttggaatctttcttcgatcatgtgggttcaaagactcttcaatcacctgggttcct ttgagtgcaatggcgaacgaaaacttaatgaccactgcctcagattctcgtcttttgtca tggtacaatggaaattgtctgctaaaatccattgactcattgcctcctcctcaacgtgat gtttcaaggccactacgccttccaatctgtgatgttattgcatctatcacactgggacag atggcattttgtggtaaagttgaggctgggggaatccgaactggttctaaggttcttgtc atgccatccggagacttggctacagttaaaaccatcgagcgggattcctctagttgcaac ttggcaagagccggggacaacattgctgttggtctgcaagggatggaccctagtcaccta gtgtcaggtggagttatatgccatccagatttccccgtgcacgttgcttctcgcttggag ctgaaaattttggttctagaaatcaccacaccaatactggttggcctgcagtttgaactg cacatacatcatgcgagggtgtctgcaagcttggttaaaatactgtcgttgttggaccag aagaccggcaaggcctcaaagaaaatgccacgcttgctcaccacgaggcaggctgctgta gttgaagtaaagctggacaaggaagtctgcgtggaagagttctcagctctgaaggccctt ggtcgagtgttcctgcggtctcgcggcaacaccgttgcagtgggcattgtgacccgaatt ctggacgaggcttaa

DBGET integrated database retrieval system