Panicum virgatum (switchgrass): 120642171
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Entry
120642171 CDS
T07260
Name
(RefSeq) probable aspartyl protease At4g16563
KO
K22683
aspartyl protease family protein [EC:3.4.23.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120642171
Peptidases and inhibitors [BR:
pvir01002
]
Aspartic peptidases
Family A1: pepsin family
120642171
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GFIT
Motif
Pfam:
TAXi_C
TAXi_N
Asp
Motif
Other DBs
NCBI-GeneID:
120642171
NCBI-ProteinID:
XP_039774527
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Position
7K:52181138..52182798
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AA seq
469 aa
AA seq
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MAPPPPLLLLLPLLSTAGAAPTISTSTTTLPLYRHLPHVAETAHHHPLSRLAAASLARAS
HLKRPAHHKAQAPSSTTALYPHSYGGYAFTASLGTPPQPLPVLLDTGSHLAWVPCTSNYH
CRNCPTAAVPTFHPRNSSSSRLVGCRNPSCLWVHSAARLAATNCTAGAVCPPYAVVYGSG
STGGLLIADTLRAPGRAAVRNFVVGCSLVSVHQPPSSLAGFGRGAPSVPAQLGLTKFSYC
LLSRRFDDNAAVSGSLVLGGGRAGGGMQYVPLLKSAAGDKQPYAVYYYLALSGVTVGGKA
VRLPERAFSANAAGAGGAIVDSGTTFTYLDPSVFQPVAEAVIAAVGGRYKRSKEAEDGLG
LRPCFALPQGAKSMALPELSLHFKGGAEMRLPLENYFVVAGRAPVTAGPPGAGEAICLAV
VTDMGGAGDVGGGPAIILGSFQQQNYLVEYDLEKERLGFRRQPCAASSS
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggctccgccgccgccgctcctcctcctcctccctcttctctccaccgccggcgccgcg
ccgaccatttccacttccaccacgacgctccccctataccgccacctcccgcacgtcgcc
gagacagcgcaccaccacccgctctcgcgcctcgccgccgcctcgctcgcccgcgcctcg
cacctcaagcgccccgcccaccacaaagcccaagcgccaagttccaccaccgcgctctac
ccacactcgtacggcggctacgccttcaccgcctccctcggcacgccgccgcagccgctg
cccgtcctcctcgacaccggcagccacctcgcctgggtgccctgcacctccaactaccat
tgccgcaactgccccaccgccgccgtccccaccttccaccccaggaactcctcctcctcc
cgcctcgtcggctgccgcaacccctcctgcctctgggtccactccgccgcgcgcctcgcc
gccaccaactgcaccgccggcgccgtctgcccgccctacgccgtcgtctacggctccggc
tcaaccggcggcctcctcatcgccgacacgctccgcgcgcctggccgcgccgccgtcagg
aacttcgtcgtcgggtgcagcctcgtgtccgtgcaccagccgccgtcgagcctcgcgggc
ttcggccgcggcgcgccgtccgtgcccgcgcagctcggactcaccaagttctcctactgt
ctgctctcccgccgcttcgacgacaacgccgccgtcagcggctcgctggtcctcggcggc
ggcagagccggcggcgggatgcagtacgtcccgctgctcaagagcgcggccggcgacaag
cagccgtacgccgtgtactactacctggccctgagcggcgtgacggtgggcggcaaggcc
gtgcggctgccggagcgggccttctccgccaacgccgccggggcgggaggcgccatcgtg
gactcgggcaccaccttcacgtacctggacccgtcggtgttccagccggtggcggaggcg
gtgatcgcggcggtgggcgggaggtacaagcggtccaaggaggcggaggacgggctgggc
ctgcgtccctgcttcgcgctgccgcagggcgccaagtccatggcgctgccggagctgtcg
ctccacttcaagggcggcgccgagatgcggctcccgctggagaactacttcgtggtcgca
gggcgagctcccgtgaccgctggtccgccgggcgccggcgaggccatctgcctcgccgtg
gtcaccgacatgggaggcgcgggagacgtgggcggcgggccggccatcattctgggtagc
ttccagcagcagaactacttggtggagtacgacttggagaaggagaggctgggcttccgc
cggcagccgtgcgccgcgtcgtcgtcgtga
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