Panicum virgatum (switchgrass): 120642268
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Entry
120642268 CDS
T07260
Name
(RefSeq) endoplasmic reticulum-Golgi intermediate compartment protein 3-like
KO
K20367
endoplasmic reticulum-Golgi intermediate compartment protein 3
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120642268
Membrane trafficking [BR:
pvir04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
120642268
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
COPIIcoated_ERV
ERGIC_N
Motif
Other DBs
NCBI-GeneID:
120642268
NCBI-ProteinID:
XP_039774661
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All DBs
Position
7K:complement(34878792..34884010)
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AA seq
386 aa
AA seq
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MDGLLSKLRSLDAYPKVNEDFYSRTLSGGIITLASSVVMLLLFVSELRLYLHAVTETTLR
VDTSRGEQLRINFDVTFPALQCSIISLDAMDISGQEHLDVKHDIFKQRIDAHGNVIATRQ
DAVGGMKMEKPLQHHGGRLEHNETYCGSCYGAQESDDQCCNTCEDVREAYRKKGWGVSNP
DLLDQCKREGFLQSIKDEEGEGCNIYGFIEVNKVAGNFHFAPGKSFQQSNVHVHDLLPFQ
KDSFNVSHKINKLSFGDYFPGVVNPLDGAQWVQHSSYGMYQYFIKVVPTAYTDINDHIIL
SNQFSVTEHFRSSESGRIQALPGVFFFYDLSPIKVTFTEQHVSFLHFLTNVCAIVGGVFT
VSGIIDSFVYHGQRAIKKKMEIGKFN
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggacgggctcctgtccaagctccgcagcctggacgcctaccccaaggtgaacgaggac
ttctacagccgcaccctctccggcggcatcatcacgctcgcctcctccgtcgtcatgctc
ctcctcttcgtctccgagctccggttatatcttcatgcagttacagagacaacactaagg
gtggatacctcaaggggcgaacaacttcgcataaattttgatgtcaccttcccagccctt
cagtgttctataattagccttgatgcaatggacatcagtgggcaagagcaccttgatgtg
aaacatgatatattcaagcaacgaattgatgcccatggcaatgttattgctacgagacaa
gatgctgttggtgggatgaagatggaaaagcccttacaacatcatggcgggcggcttgaa
cataatgaaacctattgtggctcttgctatggtgcacaagaatctgatgatcaatgttgt
aacacgtgtgaagatgttcgggaagcatacaggaaaaaaggttggggtgtatcgaatcca
gatctgcttgaccagtgcaaaagggagggcttccttcaaagcataaaggatgaagaaggt
gaaggatgcaatatttatggttttattgaagttaacaaggttgctgggaatttccacttt
gctcctgggaaaagcttccagcagtcaaatgtgcatgtgcacgacttgcttccattccag
aaggacagcttcaatgttagccataagataaataagttaagttttggtgattactttcct
ggtgtggttaatccccttgacggggcgcagtgggtgcagcattcatcatatggaatgtat
caatacttcatcaaggttgttcccactgcctacactgacataaatgatcacatcatcctc
tcaaatcagttctctgtgacggaacattttagaagtagtgaaagtggtcgcatacaagct
cttcctggcgtgtttttcttttatgacctttccccaatcaaggtcacattcacagagcaa
catgtgtcattcttgcacttcttaaccaatgtttgcgcaattgttggtggtgtgttcacg
gtttctggaatcatagattcatttgtataccatggccagagagcaatcaagaagaagatg
gaaattggcaaattcaactga
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