Panicum virgatum (switchgrass): 120642272
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Entry
120642272 CDS
T07260
Name
(RefSeq) short-chain dehydrogenase PC-15
Organism
pvir
Panicum virgatum (switchgrass)
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Gene cluster
GFIT
Motif
Pfam:
adh_short
adh_short_C2
KR
DUF1776
NAD_binding_10
Epimerase
SDR
GDP_Man_Dehyd
DFP
Motif
Other DBs
NCBI-GeneID:
120642272
NCBI-ProteinID:
XP_039774666
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Position
7K:complement(34901382..34904262)
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AA seq
284 aa
AA seq
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MSASGGEERDRSRPVVLVTGCSDGGIGHAMARAFVAAGCAVVATARSRGSMRDLQGDPRF
LLLELDVRSEESARAAVADALREHGRIDVLVNNAGVHLVAPLAEVPMDAFHQVFDTNVYG
TMRMIQAVIPHMMETRKGTIVNVGSITALAPGPWAGVYSASKAALHALSDSMRVELRSFG
INVMIVAPGGTKSNLGDKSAAKYDQINEWKYYKKYEESLRARTDVSQGPGSTPAEELAKK
VVALALKKNPPALFAYGQFTAILSMLYYTPLWFRDYFYRLVMKC
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgtcaggcggcgaggagagggaccggtctcggccggtggtgctggtgacgggg
tgctcggatggcggcatcgggcacgcgatggcgcgcgccttcgtggcggccgggtgcgcc
gtcgtcgccacggcgcggtcgcgcggctccatgcgcgacctccagggcgacccgcggttc
ctgctgctggagctcgacgtgcggtccgaggagagcgcgcgcgccgccgtggcagacgcg
ctgcgggagcacggccgcatcgacgtgctcgtcaacaacgccggggtccacctcgtcgcg
ccgctcgccgaggtgcccatggatgccttccaccaggtcttcgacaccaatgtctatggt
acaatgaggatgattcaagctgttattcctcacatgatggaaacaaggaaaggtacaatt
gtgaatgttggaagtattactgctttggcacctggaccgtgggctggtgtgtattcagcg
tcaaaagctgctcttcatgcattgagcgattcaatgagggttgaactaagaagcttcggc
atcaatgtgatgattgttgcccctggaggaacaaaatcgaatcttggggataaatctgcg
gctaagtatgatcaaatcaatgagtggaagtactacaagaagtacgaggagtcgctccga
gccaggacggacgtttcccagggccctgggtccactccagccgaggagcttgcaaagaag
gtggttgcgctggctctgaagaaaaaccctccagctctgttcgcttacggccagttcact
gctattctgtccatgctgtattacacgccgctatggtttagagactacttctacaggctg
gtcatgaaatgctag
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