Panicum virgatum (switchgrass): 120642454
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Entry
120642454 CDS
T07260
Name
(RefSeq) actin-related protein 2/3 complex subunit 2B-like isoform X1
KO
K05758
actin related protein 2/3 complex, subunit 2
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04144
Endocytosis
pvir05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120642454
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
120642454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120642454
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pvir04812
]
120642454
Membrane trafficking [BR:
pvir04131
]
Others
Actin-binding proteins
Arp2/3 complex
120642454
Cytoskeleton proteins [BR:
pvir04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
120642454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
P34-Arc
Motif
Other DBs
NCBI-GeneID:
120642454
NCBI-ProteinID:
XP_039774917
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All DBs
Position
7K:complement(39201770..39204848)
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AA seq
416 aa
AA seq
DB search
MAFFSSGSRALVEILTRIQSAERPMPVDLTFFEFGSIRYHVEASASDPENAYLSISTPPL
SHEASPSSSGLPEATLQEARKAYHKFAEVVEPPREGYVLTLKLNFSGLARPKDRVKAINQ
VSRLQSLVLSSQLRDMLGSLGPSGTMKLVCSQREPFFVSRTVFISHFLATHAETTKKINL
QRIEGSQRRAFLMRLQAERIHAIFPMRFRDDTDLAIATSFFQELQDLGNSFAGAPRCSWS
PIPPPELRGEHVHRLTTNGGFVSFGVLSRHARGKKRAARTAWILLNFQAFVKYHIKCTRS
HIQSRMRQRLEALTEVIQDASLRGGNDAKTTRSQAVVKKRSKRRLISFAKANTKLKKGLR
AILDKIKRLRLRIRVKGLDRLRRQCRCFAVPKLPVPPRRKDHRYHKLASVKSSEQG
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcttcagcagcggatcacgggcgctggtcgaaatcctgacgagaatccagagt
gccgaaagaccaatgcctgttgatctcaccttcttcgagttcggatcgatccgataccat
gtggaggcttcagcgtcggatcctgagaacgcgtacctgtcgatatcgacgccacctctt
tcccacgaggcctcaccctcctccagcggcttgcccgaggccacgctgcaggaggcgagg
aaggcgtaccacaagttcgcggaggtcgtcgagccgccccgagaagggtacgtcctgacg
ctgaagctgaacttctccggcctcgcccggccgaaagaccgcgtgaaggcgatcaaccag
gtgtcgcggctgcaatccctggtgctgagctcgcagctcagggacatgctggggagcctc
ggcccgtccggcacgatgaagctcgtgtgcagccagagggagcccttcttcgtcagcagg
acggtatttatttcccatttccttgcaacgcatgcagaaacaacaaagaaaattaatctt
cagagaattgaaggatctcagcgtcgtgcgttcctcatgcggctgcaggccgagaggatc
cacgccatcttcccgatgcgtttcagggacgacaccgacctggccatcgcgacctccttc
ttccaggagctgcaggacctcgggaactcgttcgcgggggcgccaaggtgcagctggtcg
ccgatcccgccgccggagctgcgcggcgagcacgtgcaccgcctcaccaccaacggcggc
ttcgtgtccttcggcgttctgtcgcggcacgcgagggggaagaagcgggccgccaggacg
gcctggatcctgctcaacttccaggccttcgtcaagtatcacatcaagtgcacccggagc
cacatccagagccggatgcggcagcggctggaggccctgacggaggtgatccaggacgcc
agcctacgaggagggaacgacgccaagaccaccagatcacaggcggtggtgaagaagagg
agcaagagacggctgatcagcttcgcgaaggccaacacgaagctgaagaagggtctcagg
gccatcctggacaagatcaagcggctgcggctcaggatcagggtgaagggcctggaccgg
ctccggcggcagtgccgatgcttcgccgtgcccaagctcccggtgccgccacgccggaag
gaccacaggtaccacaagctagcatcagtgaaatctagtgagcaaggctaa
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