KEGG   Panicum virgatum (switchgrass): 120642506
Entry
120642506         CDS       T07260                                 
Name
(RefSeq) syntaxin-81-like
  KO
K08492  syntaxin 18
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04130  SNARE interactions in vesicular transport
pvir04145  Phagosome
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    120642506
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    120642506
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pvir04131]
    120642506
Membrane trafficking [BR:pvir04131]
 SNARE
  Syntaxin (Qa)
   Stx-rER
    120642506
SSDB
Motif
Pfam: Syntaxin-18_N SNARE PAS_2 U3snoRNP10
Other DBs
NCBI-GeneID: 120642506
NCBI-ProteinID: XP_039775000
LinkDB
Position
7K:40478097..40481112
AA seq 316 aa
MSRVRDRTEDFKEALRVAALSHGYTEAQMAALMSSFIIRKPPPKSPFTNAAIKTLESIRE
LERFIVKHRRDYVDLHRTTERERDNIEHEVGVFVKACKEQIDILKNRIHEEEKSGSAKTW
LGTRDESSRLDLIAHQHGVVLILSERLHSVTAQFDRLRSMRFQDAINRAMPRKKIQKKPE
IKPDEPSKSNLVLKSDVSKIGDQEVSAAPMRVQELLDDETRALQVELTSLLDAVQETETK
MMEMSALNHLMSTHVLQQTQQIQYLYDQAVEATNNVERGNKELSQAIQRNSSSRTFLLLF
FFVLTFSVLFLDWYNN
NT seq 951 nt   +upstreamnt  +downstreamnt
atgtcgagggttcgggacaggacggaggacttcaaagaggccctccgcgtcgccgcgctc
tcccatggctacacggaggcccagatggccgcgctcatgtcgtctttcatcatccggaag
ccgccccccaagtctccattcaccaatgcggcgatcaagacgcttgagagtatcagggaa
ctcgagaggttcatagtgaagcacaggagggactatgtggacctgcatcgcactacagag
cgagagagggacaacatcgagcatgaagttggtgtttttgtaaaagcatgcaaggaacag
attgatatcctaaagaacaggatccatgaagaagagaagagtggaagtgcaaagacatgg
cttggcactagggatgagagttcccggttggacttgatagctcatcagcatggtgtggtt
ttaattttgagtgagcgtctccactcggtaactgcacagtttgatcggcttcggtccatg
cgttttcaagacgctattaatagagcaatgccaaggaagaagattcagaagaaaccagaa
atcaaacctgatgaaccatccaagtccaatcttgttctaaaatctgatgtatcaaaaatt
ggagatcaggaagtatctgctgcacccatgagagttcaagaactattggatgatgaaaca
agagctctccaggtggagttgacaagtcttcttgacgctgtccaagaaacggagacaaag
atgatggaaatgtcagcacttaatcatcttatgtcaacgcatgttctacaacaaactcaa
cagatccaatatttatatgaccaggctgttgaagctacgaataacgtggagcgcgggaac
aaggaactatcccaggctattcagcggaacagcagcagtagaacctttctcctcctcttt
ttctttgttctcactttctccgttctttttcttgactggtataacaactga

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