Panicum virgatum (switchgrass): 120642528
Help
Entry
120642528 CDS
T07260
Name
(RefSeq) expansin-B17 isoform X1
KO
K20628
expansin
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99981 Carbohydrate metabolism
120642528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Expansin_C
DPBB_1
EXPB1_D1
Ribosom_S30AE_C
Motif
Other DBs
NCBI-GeneID:
120642528
NCBI-ProteinID:
XP_039775030
LinkDB
All DBs
Position
7K:40461592..40466032
Genome browser
AA seq
273 aa
AA seq
DB search
MASPRSLALFLLCILAAPAPPVSAALLFGGGKSAAEAGLDMEWRPATATWYGDAEGDGSD
GGACGYGTLVDVVPMKARVGSVSPVLFKDGEGCGACYKVKCLDRGICSRRAVTVIVTDEC
PGGLCAFGHTHFDLSGAAFSRMAVAGAGGRLRDRGQLNVVYRRTACKYGGKNIAFRVNEG
STSFWLSLLVEFEDGEGDIGSMQIKQANSVEWLDMKHVWGATWCLVRGPLVGPFSVRLTT
LSAKKTLTARDVIPRNWAPKATYTSRLNFEPSL
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggcttccccgcgctccctcgccctcttcctgctctgcattctggctgcgccggcgccg
cccgtatcagccgcattgctcttcggcggcgggaagtcggccgcggaggcgggcctggac
atggagtggcggccggccaccgcgacgtggtacggcgacgccgagggcgacggcagcgac
ggcggcgcgtgcgggtacgggacgctggtggacgtggtgccaatgaaggcgcgggtgggg
tcggtgagccccgtgctgttcaaggacggcgagggctgcggcgcctgctacaaggtcaag
tgcctggaccgcggcatctgctcgcgccgggccgtgacggtcatcgtcacggacgagtgc
cccggcggcctctgcgcgttcggccacacgcacttcgacctcagcggcgccgccttcagc
aggatggccgtcgccggcgccggcggccgcctgcgcgacaggggacagctcaacgtcgtc
tacaggaggactgcctgcaagtacggcgggaagaacatcgcattccgtgtgaacgagggc
tcgaccagcttctggctctcgctgctcgtcgagttcgaggacggcgaaggcgacattgga
tccatgcagataaagcaggccaactcggtggagtggctggacatgaagcacgtgtggggg
gccacgtggtgcctggtgcggggcccgctggtggggcccttctccgtgaggctgaccacg
ctgtccgccaagaagacgctcacggcccgggacgtcatccccaggaactgggcgcccaag
gccacctacacctcgcgcctcaacttcgagccgtccctctag
DBGET
integrated database retrieval system