Panicum virgatum (switchgrass): 120642543
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Entry
120642543 CDS
T07260
Name
(RefSeq) endochitinase A-like
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120642543
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
120642543
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_19
Motif
Other DBs
NCBI-GeneID:
120642543
NCBI-ProteinID:
XP_039775052
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Position
7K:37882021..37883181
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AA seq
230 aa
AA seq
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MASSAAMSRVLLTLGLAILCAAGLAAAQNVGSVVTDSFFNGIKNQAGGGCEGKDFYTRSA
FLSAVNSYSGFAHGGSETQGKREIAAFFAHVTHETGSFCYISEIKKDDSYCNASKPEWPC
AAGKKYYGRGPLQISWNDNYGPAGRDIGFDGLGNPDAVAQDPVIAFKTALWFWMNNVHGV
ISQGFGATTRAINGDRECDGKNPDKMNARVGYYKQYCQQLGVDPGSNLTC
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggcgagctcagcggcgatgtcgagggtcctgctgaccctcgggctggcaatcctctgc
gccgccggcctggcagccgcgcagaacgtgggcagcgtcgtcaccgactccttcttcaac
ggcatcaagaaccaggccgggggcgggtgcgagggcaaggacttctacacgcggagcgcg
ttcctgagcgccgtcaactcgtactcgggcttcgcacacggcggctccgagacccagggc
aagcgcgagatcgctgccttcttcgcgcacgtcacgcacgagaccggatctttctgctac
atcagcgagatcaagaaggacgacagctactgcaacgcgagcaagccggagtggccgtgc
gcggcggggaagaagtactacgggcgcggcccgctgcagatctcgtggaacgacaactac
gggcccgccgggagggacatcggcttcgacgggctggggaacccggacgcggtggcgcag
gaccccgtgatcgcgttcaagacggcgctctggttctggatgaacaacgtgcacggggtg
atctcccaggggttcggcgccaccaccagggctatcaacggcgaccgcgagtgcgacggc
aagaaccccgacaagatgaacgcgagggtgggctactacaagcagtactgccagcagctc
ggcgtcgaccccgggagcaaccttacctgctag
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