Panicum virgatum (switchgrass): 120642600
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Entry
120642600 CDS
T07260
Name
(RefSeq) LOW QUALITY PROTEIN: probable leucine-rich repeat receptor-like protein kinase At5g63930
KO
K27590
tyrosine-sulfated glycopeptide receptor
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
120642600
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_1
Pkinase
LRR_14
PK_Tyr_Ser-Thr
LRR_4
LRR_8
UDPGT
LRRNT_2
LRR_ComC
EryCIII-like_C
LRR_At5g56370
LRR_LRWD1
Pkinase_fungal
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
120642600
NCBI-ProteinID:
XP_039775128
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All DBs
Position
7K:complement(38672531..38680847)
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AA seq
1618 aa
AA seq
DB search
MERRALLLGVALAFLLASRSQGLNHEGWLLLALKSQMVDTLHHLDSWDARDPTPCAWRGV
NCSSAPTPAVVSLDLNNMNLSGTVAPSIGGLAELARLDLSFNGFYGPIPAQIGNLSNLEV
LNLFNNNFNGIIPPEVGKLAKLVTLNLCNNKLHGPIPDEIGNMASLQDLVGYSNNLTGSL
PHSLGKLKNLKNIRLGQNLISGNIPVEIGECLNITVFGLAQNNLEGPLPKEIGRLRLMTD
LILWGNKLSGVIPPEIGNCTSLGTIALYDNNLVGPIPATIGIITNLQKLYLYRNSLNGTI
PSDIGNLSLAQEIDFSENFLIGGIPKELGNIPGLYLLYLFQNQLTGSIPTELCGLRNLSK
LDLSINSLTGPIPAGFQYMRNLIQLQLFNNKLTGNIPPRFGIYSRLWVVDFSNNSITGQI
PKDLCRQSNLILLNLGSNMLTGNIPHGITNCKPLVQLRLGNNSLTGSFPTDLCNLVNLTT
VELGRNKFSGPIPPQIGNCKSLQRLDLTNNYFTSELPREIGNLSKLVVFNISSNRLGGNI
PLEIFNCTVLQRLDLSQNSFEGSLPNEVGRLPQLELLSFADNKLTGQIPPILGKLSHLTA
LQIGGNQLSGEIPKELGLLSSLQIALNLSYNNLSGNIPSELGNLALLESLFLNNNKLTGE
IPSTFANLSSLLELNVSYNYLAGALPPIPLFDNMAVSCFVGNKGLCGGQLGRCGSQSSSS
SQSSNSVSRSLGKIIAIVAAVIGGISLILIAIIVYHMRKPMETVAPLQDKQLFSAGSNMH
VSPKDAYTFQELVTATNNFDESCVIGRGACGTVYRAILKAGQTIAVKKLASNREGSNTDN
SFRAEILTLGKIRHRNIVKLYGFIYHQGSNLLLYEYMSRGSLGELLHGQSSSSLDWETRF
MIALGAAEGLSYLHHDCKPRIIHRDIKSNNILLDENFEAHVGDFGLAKVIDMPYSKSMSA
IAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRAPVQPLEQGGDLVTWVKNYIRD
NSLGPGILDKNLDLEDQSVVDHMIEVLKIALLCTSLSPYERPPMRHVVVMLSESKDRTRV
SSASSPKKLAMDGDFPTDWRVSLSSQLQSTSGGISRQSPAAQLSARDLESTPPTHAANXS
APPSIAMAAEEKVSPHVILFPFLAHGHVPAFLRLAGLRARRPGLDVTLVSTRGVLSSLSL
PPASPPLRLHALPFSPADHGLPPGAESLADIQVHQFIIFFQASESLRPAFEEFLTGLGSR
PPVCIVSDAFFGWTADVARARGAPHAVFLPGGAFGNAVFFSAWEHLPHARTVADEFPLQD
FPGVVLHRTQIPRYMLPATGADPGTAFFRRAIAFCLQTDTVLVNTVRELEPSDLDMLRRS
LGVQPWPIGPVLAAPALSDSRGDASIIRWLDAHPPRSVLYISFGSQNSINADQMRELALG
LEASGRRFLWALRPPLGSDAKGAFDPEWLPAGFEERAARASAGLVVRGWAPQARVLAHPS
TGAFLTHCGWNSVLESLSRGVPLLGWPLGAEQFFNAKLVAEWGVCVEVARGNLESSAVEK
EKVAEAVRTVMGENATGEEMRRKAAAIARAMAAAWEAPGGSAAESLEGFLRCVEASVR
NT seq
4857 nt
NT seq
+upstream
nt +downstream
nt
atggagcgccgggctttgctcctcggggtggccctggcctttctgctggcctcccgctcc
cagggcttgaaccatgaaggatggcttctcctggcgctgaagagccagatggtcgacacc
ctccaccacctggatagctgggacgcgagggatccgacaccatgcgcgtggaggggcgtc
aactgctcgtcggcgccaactccagcggtggtgtctctagacctcaacaacatgaacctg
tcgggcaccgtcgcgcctagcattggcggcctggctgagctggcgcggctcgatctatcc
ttcaatggattctatggtcccatccctgcacagattgggaatttgtcgaatctggaggtg
cttaacttgttcaacaacaacttcaatggtataattccccctgaggtcgggaagctagct
aagctggtcacgcttaatctgtgcaacaacaagctccatggtccgatacctgatgagatt
ggtaacatggcatcacttcaggacttggtaggttacagtaataatctcactggttcactg
cctcattcactcggcaagttgaagaacctgaaaaatattcggttaggtcagaatcttata
tcaggcaacattcctgttgagataggtgaatgcctgaacataactgtatttggtcttgca
cagaacaatttggagggtcctttacctaaagagattggtaggttgagattgatgactgac
ttaatcctatgggggaacaagctttcgggtgttattccgcctgagataggaaactgtaca
agtcttggcacaattgccctctatgacaataatctagttggtcccatacctgcaacaatt
gggatcatcacgaatcttcagaagctatacctttacaggaactcattaaatggtacaatt
ccatctgacattgggaatctttctcttgcacaagagattgacttttcagagaatttctta
attggagggataccgaaagagttgggcaacataccaggcttgtatttgctctacctcttc
cagaaccagcttacaggctctattcctacagagttgtgtgggctgagaaacttgagtaaa
cttgatctatcaatcaattcactcactggtccgattccagctggatttcagtacatgaga
aatctaatccaattgcaacttttcaacaataagctcacaggcaacatacctccaaggttt
ggcatttatagccgactttgggtggtggatttctcaaacaacagtattaccgggcagata
ccgaaagatctttgcaggcagtcaaaccttattttgttgaatttggggtctaacatgctt
acagggaacattccccatggaatcacaaactgtaaaccattggtgcagcttcgtcttggc
aacaacagtctgacaggaagcttccctactgatctctgcaatctggtaaatttgacaaca
gttgagctgggtcgaaacaaatttagtggcccgattcctcctcagataggcaattgcaag
tctctgcaaaggctagaccttacaaataattatttcacgtcagagttgcctcgagaaatt
ggtaatttgtcaaaactcgttgtcttcaatatctcatctaacagactaggtggaaacata
ccactggaaattttcaattgtacagtgttgcaacgacttgatctcagccagaatagcttt
gaaggttcgttgccaaatgaagttggtagactgccacaactggagctgctatcttttgct
gataataagctaactggccagataccacccattcttggtaaactatcacatttgacagca
ctgcagattggtggcaaccagttatctggtgaaatcccaaaggagttgggcttgctgtca
agcttgcagattgccttgaatttgagctacaacaacctctctggcaacattccatcagag
cttggtaaccttgcactgttggaaagtttgtttcttaataacaacaagctgactggtgaa
atcccatctacatttgccaatctgtccagtttgcttgagctcaatgtctcctacaattat
ctcgctggtgccctcccgccaataccactttttgataatatggctgtgtcctgttttgtt
ggaaataaaggactatgtggtggacaacttggtagatgtggatcccagtcatcatctagt
tcccagtcatccaattcagtcagtcgctctttgggcaagatcatagcaattgttgcggct
gtcattggagggatttcacttattcttattgcaataattgtgtaccatatgagaaaacca
atggagacagtagcacccttgcaagacaagcaacttttttcagctggttcgaacatgcat
gtttctcctaaggatgcgtatacatttcaggaattggtcactgctacaaataactttgat
gagagttgtgttattggaaggggagcttgtggtacggtgtacagagccatcctgaaggct
ggacagacaattgcagtaaagaagcttgcttctaacagggaagggagcaacacggacaac
agctttcgtgcagagattctgactcttggaaagataaggcatcgtaacattgtgaagctg
tacggttttatataccaccaaggttccaaccttctactctatgagtacatgtcaagaggc
agtcttggtgagctacttcatgggcaatcatcatcttcacttgattgggagacacgcttc
atgatagctcttggagcggctgaagggctttcgtacttgcatcacgattgcaagcctcgc
atcatccaccgtgatatcaaatccaataacattttacttgatgagaacttcgaagcccat
gttggtgattttgggttggcaaaggtgatcgacatgccatactccaagtcaatgtctgca
attgcaggttcatacggctatatagccccagaatatgcttataccatgaaggttactgaa
aaatgtgacatatatagctatggagtcgtgctgctggagctgctaactgggcgtgcaccc
gtgcaacccttggaacagggaggtgatctggtaacatgggtgaaaaactacatcagggac
aattctttgggtccagggatacttgataaaaatttggatttagaagaccaaagcgtcgtc
gatcatatgatcgaggtcttgaaaattgccttgttatgtactagcttgtctccatacgag
agaccaccgatgcggcatgttgtagttatgctaagcgagtctaaagataggaccagggtg
agctctgcctcctcacctaaaaagttggcaatggacggtgactttccaacagattggcgc
gtcagcctttcgtcacagcttcagagcacaagcggcggcatcagtcggcagtcgccggcg
gctcagctgagtgctcgagacctcgagtccactccacccacccacgcagccaactgatca
gcgcctccatccatcgccatggcggcggaggagaaggtaagcccacacgtcatcctcttc
cctttcctggcgcacggccacgtccccgccttcctccgcctggccggcctccgcgcgcgc
cgtccggggctcgatgtcactctcgtctccacccggggcgtcctcagctccctctccctc
ccgccggcgtcccctcccctgcgcctccacgcgctccccttctcgcccgccgaccacggc
ctgcccccgggcgccgagtccctcgccgacatccaggttcaccagttcatcatcttcttc
caggcctccgagtcgctccgccccgcgttcgaggagttcctcacgggcctcggttcccgt
cccccggtctgcatcgtctccgacgccttcttcgggtggacggccgacgtcgcgcgcgcg
cggggcgcgccccacgccgtgttcctcccgggcggcgcgttcggcaacgccgtgttcttc
tcagcgtgggagcacctcccgcacgcccgcacggtcgccgacgagttcccgctgcaggac
ttcccgggcgtcgtgctccaccgcacgcagatcccgaggtacatgctcccggcgacgggg
gcggaccccgggacggccttcttccggcgcgccatcgccttctgcctccagaccgacacg
gtcctcgtcaacaccgtccgggaactggaaccctccgacctcgacatgctccgaagaagc
ctcggcgtccagccgtggccgatcgggccggtcctcgcggcgccggccctgtcggactcg
cggggcgacgccagcatcatccggtggctggacgcgcacccgccgcgctcggtgctgtac
atatccttcgggtcgcagaacagcatcaacgcggatcagatgagggagctcgcgctgggg
ctggaggcaagcggccgccgcttcctctgggcgctccggccgccgctggggtccgacgcg
aagggcgcgttcgatcccgagtggctcccggccggcttcgaagagcgagcggcgcgggcg
agcgcggggctggtggtgcgcgggtgggcgccgcaggcgcgggtcctggcgcacccgtcg
acgggcgcgttcctgacccactgcgggtggaactccgtcctcgagagcctctcccgcggc
gtgccgctgctggggtggccgctgggcgccgagcagttcttcaacgcgaagctcgtggcc
gagtggggcgtctgcgtggaggtggcgaggggcaacttggagagctcggcggtggagaag
gagaaggtggcggaggccgtgcggacggtgatgggtgagaatgcgacgggcgaggagatg
aggaggaaggcggcggcgatcgcgcgcgccatggcggccgcgtgggaggcgccgggcggg
tcggcggcggagagcttggaagggttcctgaggtgcgtcgaggcgtccgtgcgctga
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