Panicum virgatum (switchgrass): 120642622
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Entry
120642622 CDS
T07260
Name
(RefSeq) presequence protease 1, chloroplastic/mitochondrial-like
KO
K06972
presequence protease [EC:3.4.24.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120642622
Peptidases and inhibitors [BR:
pvir01002
]
Metallo peptidases
Family M16: pitrilysin family
120642622
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PreP_C
M16C_assoc
Peptidase_M16_C
Peptidase_M16
Motif
Other DBs
NCBI-GeneID:
120642622
NCBI-ProteinID:
XP_039775135
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Position
1K:52315216..52325847
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AA seq
1084 aa
AA seq
DB search
MERVALLRTSGRRLLHRCRGGRPAVVPAAASSSLARRSLSSSLPARGYSSLPGGGARFLA
AAAPLHCSGRYWPAATPRLARRLSAPAVSTSPSPVPYDTDDVHEYAAKLGFEKVSEQVID
ECKSTAVLYKHKKTGAEVMSVSNDDENKVFGIVFRTPPKNSTGIPHILEHSVLCGSRKYP
LKEPFVELLKGSLHTFLNAFTYPDRTCYPVASTNTKDFYNLVDVYLDAVFFPKCVEDFQT
FQQEGWHYELDNPDEEITYKGVVFNEMKGVYSQPDNIMGRVSQQALSPENTYGVDSGGDP
NEIPKLTFEEFKEFHSKYYHPSNARIWFYGDDDPKERLRVLSEYLDQFEASTAPNESKIW
PQRLFKEPVRVIEKFPAGQEGDLTKKYMVCINWLLSEEPLDVETELTLGFLDHLLLGTPA
SPLRRILLESGLGDAIVGGGVEDELLQPQFSIGLKGVSEDNIQKVEELVMQTLKNLVEEG
FASDAVEASMNTIEFALRENNTGSFPRGLSLMLRSIAKWIYDMDPFEPLKYEQPLQQLKS
RIAEEGSKAVFSPLIENFILKNTHRVTVEMQPDPEKASRDEAAEKEILKQVKSSMTQEDL
AELARATKELKEKQETPDPPEALKAVPCLSLQDIPKNPIHIPMEVGEINGVKVLQHDLFT
NDVVYSEVVFDMGSMKKEHLQLLPLFCQSLLEMGTKDMDFVQLNQLIGRKTGGISVYPFT
SSVRGKEDPLTRIIVRGKAMAPRVEDLFNLMYTILQDVQFTEQQRFKQFVCQSKARMENR
LRGSGHGIAAARMDAKLNAAGWIGEQLGGVSYLEYLRDLETKIDQDWDSISSSLEEMRKS
LFSKKGCLINLTSDWKNLEKSSQHIAKFLDSLPSNPSLGNDPWLSRLPSVNEAIVVPTQV
NYVGKAGNLYQSGYQLNGSAYVISKHISNTWLWDRVRVSGGAYGGFCDFDTHSGVFSYLS
YRDPNLLKTLEVYDETAKFLRELEMDDDALTKAIIGTIGDVDAYQLPDAKGYSSLMRYLL
GITDEERQQRREEILSTSLKDFKEFADAVESIKDNGVVVAVASPDDVEAANKEKPVFPEV
KKCL
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atggagcgggtggcgctgctccgcacctcaggccgccgcctcctacaccggtgccgcggg
ggcaggcccgccgtcgtccccgcagccgcctcctcgtccttggcgcgccggtcgttgtcg
tcctcattaccggctcgcggctactcgtcgctgcccggcggcggcgcacgatttctggcc
gcggccgcgccgctgcactgctccgggcggtactggccggccgccactccacggctcgcg
cgaaggctgtccgcgcctgccgtctctacctcgccctctcctgtgccctatgatacagat
gatgtgcatgagtatgctgcaaagctcggatttgaaaaggtctctgaacaggttatagat
gagtgcaaatcaactgctgttctttacaagcacaagaagacgggtgctgaagtgatgtct
gtgtcaaacgacgacgagaataaagtgtttggcattgttttccggacccctccgaaaaac
tcgactggtataccccacatccttgaacacagtgttctctgtggatcaagaaaataccct
ttgaaagaaccatttgttgagctcctaaaaggaagcttgcatacattcctgaatgcattc
acatatcctgatcggacatgttatccagttgcatcaacaaacactaaggatttctacaac
ctggtagatgtataccttgatgctgtctttttccctaaatgtgtggaggacttccaaaca
tttcaacaagaaggatggcactatgagcttgacaaccctgacgaagagataacgtacaaa
ggtgttgtcttcaatgagatgaaaggagtttactctcaacccgataacataatgggtcgt
gtatcccaacaggcactttcccctgagaacacatatggcgtcgatagtggcggagaccca
aatgaaattccaaagcttacttttgaagaattcaaggagttccacagtaagtattatcat
ccaagcaatgcgaggatctggttctatggtgatgatgacccaaaagagcggctgcgcgtt
ctaagtgaataccttgaccaatttgaagccagcactgctcctaatgaatcaaagatttgg
ccacagaggctattcaaagaaccagtgagggtcatagagaagttccctgctggtcaagaa
ggcgatttaacaaaaaaatatatggtgtgcattaattggctgttatcagaggagcctcta
gatgtagaaactgagcttacacttggtttcctggatcatctattgctggggactcctgct
tcaccacttagacggattcttcttgaaagtggtttaggagatgctatagttggtggtggt
gttgaggatgagctccttcaaccacaatttagtattggccttaaaggtgtatcagaggat
aacattcaaaaagttgaagagttggttatgcaaactttgaagaatctggtagaagaaggt
tttgcatcagacgcagtggaggcttctatgaacacaatcgaatttgctcttagggagaac
aacacaggatcattccctcgaggcttatcactcatgcttcgctcaattgccaaatggata
tatgatatggacccttttgagcctctgaaatatgaacagccattgcagcaattgaaatca
cgcattgcagaggagggatcaaaagctgtcttctcaccactcattgaaaattttattttg
aagaatacgcatcgtgtcacagttgaaatgcagcctgatccagagaaagcatcacgtgat
gaagcagctgagaaggaaattctaaaacaagtgaaatctagcatgactcaggaggatctt
gcagagttggcacgtgctacaaaggagctaaaggaaaaacaagaaacaccagatcctcca
gaggctctcaaggctgtcccttgtttatcattgcaagatatccccaaaaatcctattcat
ataccaatggaggttggagagataaatggtgtcaaggttttgcaacacgatctcttcacc
aatgatgttgtctactctgaagttgtatttgacatgggctcaatgaagaaagagcaccta
cagttgctaccattgttctgccaatccttgctggagatgggcacaaaagacatggacttt
gtgcaacttaatcaattaattggaagaaaaactggaggcatatcagtttacccgttcaca
tcgtcagttaggggtaaagaagatcctcttactcgcattattgttcggggaaaggcaatg
gcaccacgagtagaagatttgtttaatctgatgtacaccattcttcaagacgttcagttc
acagaacaacagaggttcaagcagttcgtttgtcaaagtaaagcaagaatggagaatcgc
ttgaggggcagcggccatggcatagcagctgctagaatggatgctaagttaaatgcagct
ggatggattggtgaacaactgggtggtgttagttatctcgagtatctgcgggacctggaa
actaagattgatcaagactgggacagcatatcatcttcacttgaggagatgagaaaatca
ctcttttccaagaaaggttgcttgatcaacctaacaagtgactggaaaaatcttgagaaa
tcaagccaacatattgccaagtttcttgattcactaccaagtaacccatcccttggaaat
gatccatggctttctcggctaccttctgttaatgaagccattgttgtcccaactcaggta
aattatgttggaaaagctggcaacctttaccaaagtggataccagctcaatggaagtgcc
tatgtcatctcaaagcacataagcaatacatggttatgggaccgtgttcgagttagtggt
ggcgcatatggaggtttttgtgattttgacacccattcaggagtgttctcctatttgtca
tatcgtgatccaaacttgctgaaaacactagaggtctatgatgagacagcaaaattccta
agagagctagaaatggatgatgatgcgctcacaaaagctattattggaaccataggtgat
gttgacgcctatcagctacctgatgctaaaggttacagcagtctaatgcgatatttgctg
ggtatcaccgacgaggaacgccagcaaagacgtgaagagatactatcgacgagcctgaag
gatttcaaggagtttgctgatgcagtcgaaagcatcaaggacaacggggtggttgttgct
gtagcatcacctgatgatgtcgaagctgcaaataaggaaaagccggtattcccagaagta
aagaagtgcctgtga
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