Panicum virgatum (switchgrass): 120642700
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Entry
120642700 CDS
T07260
Name
(RefSeq) cytoplasmic tRNA 2-thiolation protein 1
KO
K14168
cytoplasmic tRNA 2-thiolation protein 1 [EC:2.7.7.-]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
120642700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvir03016
]
120642700
Transfer RNA biogenesis [BR:
pvir03016
]
Eukaryotic type
tRNA modification factors
Thiolation factors
120642700
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Ortholog
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GFIT
Motif
Pfam:
zn-ribbon_14
ATP_bind_3
tRNA_Me_trans
Motif
Other DBs
NCBI-GeneID:
120642700
NCBI-ProteinID:
XP_039775202
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All DBs
Position
1K:complement(52344364..52347742)
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AA seq
359 aa
AA seq
DB search
MGSSVGDSAKLQPSRAGSRLCVRCGERKAALKRPKTLEQICRECFYIVFEDEIHQTIVDN
SLFKAGERVAIGASGGKDSTVLAYVLSELNCRHNYGLDLFLLSVDEGITGYRDDSLETVK
RNEIQYGLPLKIVSYKDLYGWTMDDIVKAIGLKNNCTFCGVFRRQALDRGAALLKADKIV
TGHNADDIAETVLLNILRGDIARLSRCTFITTGEDGPIPRCKPFKYTYEKEIVMYAYFKK
LDYFSTECIYSPNAYRGFAREFIKDLERMRPRAILDIIKSGENFRISTTTKMPEQGTCER
CGYISSQRLCKACVLLDGLNRGLPKLGIGRTKAGDGKERIKHSERNTSSLQGKHGNFDF
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgggcagctccgtcggtgacagcgcgaagctacagccatcaagggcagggagtcgcctc
tgcgtgcggtgcggcgagaggaaggccgcgctgaagcggcccaaaaccctagagcagatc
tgtagggaatgcttctacatcgtctttgaggacgaaattcatcaaactattgtcgacaat
tctttgtttaaagctggtgagcgtgtggcaatcggtgcttctggtggaaaagattcaaca
gtgctcgcatacgtgttatcggagttaaactgtcgtcacaactatggcctcgatttgttt
cttttatctgttgatgaaggaatcacaggatatagagacgactcactagaaacagttaaa
aggaatgaaatacagtatggtctgccactgaagattgtttcctataaagacctctatggc
tggacaatggatgatattgttaaagcaattggtctgaaaaataattgtacattctgtgga
gtttttcgacgtcaggcactagatcgaggtgctgctctcctgaaggctgataagattgta
actgggcataatgcagatgacattgcagaaactgtcttgctgaatattctgcgtggtgat
attgcaaggttaagtagatgtacctttataactactggagaagacgggccaatcccaaga
tgcaagcctttcaaatacacctatgagaaggagattgtcatgtacgcatacttcaaaaag
ctggactacttctccacagaatgcatctattcaccaaatgcataccgtggttttgctcgt
gaatttattaaagatttagaaaggatgaggcctagagctatactggacatcataaaatct
ggagaaaatttcagaatctccacaacaacaaagatgccagagcaagggacgtgtgaacgc
tgtggctacatttctagtcagagattatgcaaagcatgtgtcttgctggatggattgaat
cgaggtttgccgaaactaggcattggaaggactaaagctggtgacggcaaggaacgcatc
aaacattcagagaggaatacatcgagcttacaaggaaaacatgggaacttcgacttttag
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