Panicum virgatum (switchgrass): 120642706
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Entry
120642706 CDS
T07260
Name
(RefSeq) T-complex protein 1 subunit alpha
KO
K09493
T-complex protein 1 subunit alpha
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120642706
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pvir03037
]
120642706
04147 Exosome [BR:
pvir04147
]
120642706
Chaperones and folding catalysts [BR:
pvir03110
]
Heat shock proteins
HSP60 / Chaperonin
120642706
Cilium and associated proteins [BR:
pvir03037
]
Primary cilia and associated proteins
BBS-CCT complex
120642706
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120642706
Exosomal proteins of colorectal cancer cells
120642706
Exosomal proteins of bladder cancer cells
120642706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
SCAB_CC
Motif
Other DBs
NCBI-GeneID:
120642706
NCBI-ProteinID:
XP_039775205
LinkDB
All DBs
Position
7K:41889443..41894868
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AA seq
542 aa
AA seq
DB search
MAITPDILGERQSGQDVRTQNVMACGAVANIVKSSLGPVGLDKMLVDDIGDVIITNDGAT
ILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIIAAELLKRGNDLVKNKIHPTSIISG
YRLAMREACKYVEEKLAVKVDRLGKDSLINCAKTSMSSKLINSDSDFFATMVVDAVQAVK
TTNAKGEVKYPIKSINILKAHGKSQKDSYLLNGYALNTGRAAQGMPTRVTPARIACLDFN
LQKTKMQLGVQVLVTDPRELEKIRQRESDITKERIEKILKAGANVVLTTKGIDDMSLKYF
VEAGAIAVRRVRKEDLRHVAKATGATMITTFADMEGEETFDSSFLGHADEVVEERIADDD
VILVKGTKNTSAVSIILRGANDFMLDEIERSLHDALCIVKRTLESNMVVAGGGAVEAALS
VYLENLATTLGSREQLAIAEFAESLLIIPKVLSVNAAKDATELVAKLRAYHHTAQTKADK
QHFSSMGLDLSKGIIRNNLEYGVIEPAMSKVKIIQFATEAAITILRIDDMIKLTKEEGNE
EE
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcacgcccgacatcctcggcgagcgccagtccggccaggacgtccgcacgcag
aacgtgatggcgtgcggggcagtggccaacatcgtcaaatcctcgctcggccctgtcggg
ctcgacaagatgctagtggatgacattggggatgttataataactaatgatggagcaacc
atactgaagatgttggaagtcgagcacccagctgccaaggttcttgttgagttggctgag
ctccaggaccgtgaggtaggagatggaacaacttcagttgtcatcattgccgcagagttg
ctcaagagaggcaacgatcttgtgaaaaataagatccatccgacctctataatcagtggc
tacaggcttgctatgcgcgaagcctgcaaatatgtggaggaaaagttggcagtcaaggtt
gataggcttggaaaagactcccttattaactgcgcaaaaactagcatgtcatcgaaactg
attaatagtgacagtgatttctttgcaactatggtcgttgatgcagttcaagcagtgaag
actacaaatgccaagggggaagtgaagtatccaatcaagagcatcaatattttgaaagct
catggtaaaagtcagaaggatagttatctgctgaatgggtacgcattaaacacaggccgt
gcagctcaaggaatgcctactagagtaactcctgctagaattgcttgtcttgattttaac
cttcagaagacaaaaatgcaacttggtgtccaagttcttgtaactgatccaagggaactt
gagaagattcgtcaaagagaatctgacataacaaaggagcgaattgagaaaattctcaag
gctggagctaatgttgtgttgaccaccaagggaattgatgatatgtccttgaagtacttt
gtcgaggctggagcaattgcagtaaggcgtgtgcgcaaggaagatttgcgtcatgttgcc
aaagccaccggtgcaactatgattactacttttgcggacatggaaggtgaagaaacattt
gattcatcattccttggacatgcggatgaagttgtggaggaaagaattgcagatgatgat
gttatcctggtgaaaggcacgaagaacaccagcgcggtgtccataatacttagaggtgca
aatgatttcatgcttgatgagattgaacggtccttgcatgatgccttatgcattgtgaag
agaaccctggagtcaaatatggttgttgctggcggtggtgcagtcgaagctgcattgtca
gtttacttggagaaccttgccacaaccctgggatctagggaacagttggcaattgctgaa
tttgctgaatctttgttaatcatacccaaggtactctctgttaatgctgcaaaagatgca
actgagcttgtagcaaaacttagggcatatcatcatactgctcaaacaaaggctgataag
caacatttctcaagcatgggtcttgacctctctaaaggtatcattcgcaacaaccttgag
tatggtgtgattgaacccgcgatgagcaaagtaaagattattcagtttgccactgaggca
gccatcactatactgaggattgatgacatgatcaagcttaccaaggaagagggtaacgaa
gaggagtaa
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