Panicum virgatum (switchgrass): 120642739
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Entry
120642739 CDS
T07260
Name
(RefSeq) copper-transporting ATPase HMA5-like
KO
K17686
P-type Cu+ transporter [EC:
7.2.2.8
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
120642739
Enzymes [BR:
pvir01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.2 Linked to the hydrolysis of a nucleoside triphosphate
7.2.2.8 P-type Cu+ transporter
120642739
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GFIT
Motif
Pfam:
HMA
Hydrolase
E1-E2_ATPase
DUF6286
Hydrolase_3
HMA_PCA1
GerE
Motif
Other DBs
NCBI-GeneID:
120642739
NCBI-ProteinID:
XP_039775244
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All DBs
Position
7K:42308926..42314757
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AA seq
1036 aa
AA seq
DB search
MRPGLNQITLSPNNNFANQIKENQTQKRSPIRRHRTARAVKMAASSRALFLSCFHGGGAE
VSRHLALRPRYPSMPRRPRTAAVTGDASEGGGSGGDLEAAKGAAEEEKVAVFAVTGMTCA
ACAGSVEKAVKRLPGIHDAAVDVLGGRVQVVFYPAFVSEEKIREAIEDVGFEAKLINEEV
REKNILVCRLHIKGMTCTSCTSTVESALQAFPGVQRASVALATEEAEIRYDRRIVAANQL
IQAVEETGFEAVLITTGEDRSRIDLKIDGVLNERLIMILESSIQALPGVEDIKVDTELHK
ITISYKPDQTGPRDLIEVIESATSGDVTASIYPEAEGREHHRYGEIKRYKQSFLWSLIFT
IPVFLTSMVFMYIPGLKDGLDKKVVNMMSIGELLRWILSTPVQFIIGRKFYTGAYKAMCH
GSPNMDVLIALGTNTAYFYSVYSVLRAATSENYMSNDFFETSSMLISFILLGKYLEILAK
GKTSEAIAKLMDLAPETATLLIHDHEGNVVGEKEIDSRLIQKNDVIKVVPGGKVASDGFV
IRGQSHVNESMITGESRPVAKRKGDTVIGGTVNENGVLHVRATFVGSESALAQIVRLVES
AQMAKAPVQKFADQISRVFVPLVIVLSVLTWLVWFLAGRFHGYPRSWIPSSMDSFQLALQ
FGISVMVIACPCALGLATPTAVMVATGVGASQGVLIKGGQALESAHKVDSIVFDKTGTLT
IGKPVVVNTKLLKNMVLREFYDYVAAAEDNSEHPLAKAIVEHAKKLHSEENHIWPEARDF
ISVPGHGVKANINHKIVIVGNKSFMLSSSIDISLEAMEILTEEEEKAQTAIIVAMDQEVV
GIISVSDPIKPNANDVISYLRSMNVESIMVTGDNWGTANAIGKEVGIEKIIAEAKPEQKA
EKVKELQLSGKTVAMVGDGINDSPALVSADVGLAIGAGTDVAIEAADIVLMKSNLEDVVT
AIDLSRKTFFRIRMNYVWALGYNIIGIPIAAGVLFPSFRVRLPPWVAGAAMAASSVSVVC
WSLLLRYYKSPKTFAN
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgcggccaggtttaaaccaaatcactctctccccgaacaataatttcgcaaaccaaatt
aaagagaaccaaacccaaaagcgatctccaatacggaggcatcgcaccgcacgggcggta
aaaatggcggctagcagtcgagccctcttcctctcgtgcttccacggcggcggcgccgag
gtgagccgccacctcgcgctgcggccgcggtacccgtccatgccgcggcgccctaggacg
gctgcggtcaccggtgacgcgagtgaaggcggaggaagcggcggcgacctggaggccgcg
aagggggcggcggaggaggagaaggtggctgtgttcgcggtgaccggaatgacgtgcgcc
gcgtgtgcggggtcggtggagaaggccgtcaagcgcctcccgggcatccacgacgccgcc
gtcgacgtcctcgggggccgcgtgcaggtcgtcttctacccggccttcgtctcggaggag
aaaattagggaagccattgaggatgttggttttgaagctaagctgattaatgaggaggtc
agggaaaagaacattctagtatgcagactgcatataaaaggaatgacctgcacttcttgc
acaagtacagtggaatctgccttgcaagcttttcctggggttcaaagagcttcagttgca
ttggctactgaagaggcagagatccgttatgatcgcaggattgttgctgctaaccaactt
atccaggcagttgaagagactggatttgaagcagtcctgatcactacaggagaagatagg
agcaggatagacctcaaaatagacggtgttctcaatgagaggttaataatgatactagaa
agctctatccaagctcttcctggtgtggaagacataaaagttgacactgaactccataag
atcaccatatcatacaagcctgaccagacaggacccagggacctcattgaagtcattgag
tcagccacatctggtgatgttacggcatcaatatatccagaagcagaaggaagggagcat
cacaggtatggggaaatcaagcgatacaagcaatctttcttgtggagcttaatattcact
atcccagtgtttctcacatccatggtattcatgtacattcctgggctgaaggatggtctt
gacaaaaaggttgtcaacatgatgagcattggtgaactattgcggtggatcttgtcaaca
ccggtccaatttataattggccgcaagttttatactggtgcttacaaggcaatgtgccat
ggctcgccgaacatggatgttctcattgctctagggacaaacactgcttacttttactca
gtttactcggttcttcgagcagctacctctgagaattacatgtcaaacgattttttcgag
acaagttccatgctcatatcatttatcctccttgggaagtaccttgagatcttggcaaaa
gggaagacctctgaggctatcgccaaactgatggatcttgcaccagaaactgcaacacta
ttaatacatgaccatgaagggaatgttgtaggagagaaagagattgacagcagattgatt
cagaaaaatgatgttatcaaagtagtgcctggtgggaaagttgcttctgatggctttgtt
atacggggccaaagccatgtgaatgaaagtatgatcactggagaatcaaggcccgtggca
aagaggaaaggtgacaccgtaattggaggtacggtcaatgagaatggtgtgctccatgtt
cgggcaacatttgttggatccgagagtgcactggcacagattgtgagacttgtagaatca
gcgcaaatggcaaaagctcctgtccagaagtttgctgatcagatatcaagagtctttgtc
ccactggttattgtactctccgtgcttacttggcttgtgtggttcttagctgggagattc
catggttatcctcgctcatggataccatcttccatggatagctttcaacttgcccttcag
tttggaatatccgttatggtgattgcttgtccttgtgccttagggcttgcaactccaact
gcggtaatggttgcaactggagttggcgcctcacaaggcgttttgatcaagggtgggcaa
gctctcgagagtgcacataaggtggacagcatcgtatttgataaaacgggaacactgact
attgggaaacctgttgtcgtcaataccaagcttctcaaaaacatggtcttgcgtgaattc
tatgattatgttgctgcagcagaggacaacagtgagcacccactggcgaaggcaatagtg
gagcatgccaagaagttgcactcagaagaaaaccacatctggcctgaagcaagagatttt
atatcagtacctggacatggtgtcaaggccaacattaatcataagattgttattgtgggg
aacaagagctttatgctgtcatcaagcattgatatctcattggaagctatggaaatactc
acggaagaagaggagaaagcacaaacagccattattgtggctatggatcaagaagttgtg
ggcataatctctgtatctgaccctataaaaccaaacgccaatgacgtgatatcatacctc
agatccatgaacgtggagagcataatggtgactggggacaactgggggactgctaatgcc
attggcaaagaggtcggcatagaaaagatcattgctgaagcaaaaccagagcagaaggct
gagaaggtgaaggaacttcagttgtctggaaaaaccgtggcaatggttggtgatggaata
aacgactccccagcacttgtgtcagctgatgtaggtctggcaattggtgcaggaacagat
gtcgccattgaagcggctgacatcgtcctcatgaagagcaacttggaggatgtggttact
gctatcgatctctccaggaagacattcttccgcattcgaatgaactacgtctgggctctc
ggctacaacatcattggcataccgattgctgcgggggtgctcttcccatcattccgggtc
cgcctgcctccatgggttgccggcgctgcaatggcggcttcatctgtcagtgttgtctgt
tggtccctgctgctgaggtactacaaaagtccaaagacgtttgccaattga
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