KEGG   Panicum virgatum (switchgrass): 120642822
Entry
120642822         CDS       T07260                                 
Name
(RefSeq) alpha-amylase-like
  KO
K01176  alpha-amylase [EC:3.2.1.1]
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir00500  Starch and sucrose metabolism
pvir01100  Metabolic pathways
pvir01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00500 Starch and sucrose metabolism
    120642822
Enzymes [BR:pvir01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.1  alpha-amylase
     120642822
SSDB
Motif
Pfam: Alpha-amyl_C2 Alpha-amylase Glyco_hydro_70 AMT4_dom_C
Other DBs
NCBI-GeneID: 120642822
NCBI-ProteinID: XP_039775365
LinkDB
Position
1K:complement(52539305..52541506)
AA seq 428 aa
MANKGFFLVALFIALIGLSSNSAAGQVLFQGFNWESWKQNGGWYNFLMGKVEDIAEAGIT
HVWLPPASHSLAEQGYLPGRLYDLDASKYGNEAQLKSLIEAFHDKGVKVIADIVINHRTA
EHQDGRGIYCMFEGGTPDSRLDWGPHMICSDDRTYSDGTGNPDTGADFGGAPDIDHLNTR
VQQELIGWLNWLKTDIGFDAWRLDFAKGYSADVAKIYIDNTEPSFAVAEIWTSLAYGGDG
RPYYDQNAHRQELVNWVDRVGRSGPATTFDFTTKGILNVAVDGELWRLRGADGKAPGMIG
WWPAKAVTFIDNHDTGSTQHMWPFPADKVMQGYAYILTHPGTPMIFYDHFFDWGLKNEIA
HLVSIRDRHGIQPDSELRIIEADADLYLAEIDGKVVVKIGSRFDCEHLIPEGFQVSAHGD
GYAVWEKI
NT seq 1287 nt   +upstreamnt  +downstreamnt
atggcgaacaagggattctttctagtggctctgttcatcgcccttattggcctgtcgtcc
aactcggcagccgggcaagtcctgtttcagggcttcaactgggagtcgtggaagcagaac
ggaggatggtacaacttcctgatgggcaaggtggaggacatcgccgaggctggcatcacc
cacgtctggctccctccggcgtcgcactctctggccgagcaaggctacttgccgggtcgc
ctgtacgatcttgacgcatccaagtacggcaacgaggcgcagctcaagtccctgatcgag
gcgttccatgacaagggcgtcaaggtcatcgccgacatcgtcatcaaccaccgcacggcg
gagcaccaggacggccgcggcatctactgcatgttcgagggcggcacgccggactcccgc
ctcgactggggcccccacatgatctgcagcgacgaccggacctactccgacggcacgggc
aaccccgacaccggcgcggacttcggcggcgccccggacattgaccacctcaacacgcgc
gtccagcaggagctcatcggctggctcaactggctcaagacggacatcggcttcgacgcc
tggcgcctcgacttcgccaagggctactccgccgacgtcgccaagatctacatcgacaac
accgagcccagcttcgcggtcgcggagatatggacctcgctggcctacggcggcgacggc
aggccttactacgaccagaacgcgcaccggcaggagctggtgaactgggtggaccgcgtg
ggcaggtccggtcctgccacgacgttcgacttcaccaccaagggcatcctcaacgtcgcc
gtcgacggcgagctgtggcggctccgcggcgccgacggcaaggcgcccggcatgatcggg
tggtggccggccaaggccgtcaccttcatcgacaaccatgacaccggctcgacgcagcac
atgtggccgttccccgccgacaaggtcatgcagggctacgcctacatcctcacgcacccc
ggcaccccaatgatcttctacgatcacttcttcgactggggcctcaagaacgagatcgcg
cacctggtgtccatcagggaccgccacgggatccagccggacagcgagctgcgcatcatc
gaggccgacgccgacctctacctcgctgagatcgacggcaaggtcgtcgtgaagatcgga
tcgagattcgattgcgagcacctaatccccgaaggcttccaggtctcggcgcacggcgat
ggctacgctgtctgggagaaaatctga

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