Panicum virgatum (switchgrass): 120642832
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Entry
120642832 CDS
T07260
Name
(RefSeq) auxin response factor 12 isoform X1
KO
K14486
auxin response factor
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120642832
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GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
120642832
NCBI-ProteinID:
XP_039775371
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Position
7K:complement(51298464..51307064)
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AA seq
833 aa
AA seq
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MSSSSAASIGQTPPLPPEEEKKCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVSSG
LAPWCRSTTWRRPDECKVAASTNKEVDGHIPNYPNLPPQLICQLHDVTMHADVETDEVYA
QMTLQPLNPQEQNDAYLPAEMGIMSKQPTNYFCKTLTASDTSTHGGFSVPRRAAERVFPP
LDFTQQPPAQELIARDIHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIW
NEKNQLLLGIRHASRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSE
FVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWPSSYWRSV
KVGWDESTAGERPPRVSLWEIEPLTTFPMYPSLFPLRVKHPWYSGVAALHDESNALMWLR
GVAGEGGFQSLNFQSPGIGSWGQQRLHPSLLSNDHDQYQAVVAAAAASQSGGYLKQQFLH
LQQPMQSPQEQCNLNPLLQQQIMQQASQQQLVSPDSQNMQSVLSPSSIQQQLHQLQQMQH
AHNDQKQKIQPDQPYQVPSSAVLPSPTSLPSHLREKFGFSDPNVNSSSYISSSIHENMLE
SNFLQGSSKCVDLSRFNQPLVSEQQQQQAWKQKFMGSQSMSFGGSGSLNSPTSKDGSVDN
KVGHDGQNQSLFSPQVDNSSLLYNMVPNLTSNVADNNISAIPSGSTYLQNPTYGCLDDSS
GLLQNTGENDPTTRTFVKVYKSGSVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRS
GWQLVFVDRENDVLLLGDDPWESFVNSVWYIKILSPEDVHKMGKQGNDPRYLS
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgagctcgtcgtcggcggccagcatcggccagacgccgccgctgccgccggaggaagag
aagaagtgcctcaactcggagctgtggcacgcgtgcgccggcccgctcgtctgcctcccc
accgtcggcacgcgcgtcgtctacttcccgcagggccacagcgagcaggtgagctccggt
ctcgctccgtggtgccggtctaccacctggcgtcgccctgatgagtgcaaggtggcagcg
tcgacgaacaaggaggtggacgggcacatccccaactaccccaacctgccgccgcagctc
atctgccagctacatgatgtcacaatgcatgcggatgtggagactgatgaagtgtacgct
cagatgacgctgcagccgctgaacccacaagagcagaacgatgcatacctgccggcggag
atggggatcatgagcaagcagcctacgaattacttctgcaagacgctgacggccagcgac
accagcacgcatggcgggttctctgtgccccgtcgtgcagcggagcgcgtcttcccccct
ctggatttcacacagcagcctccagcacaggagcttattgcacgggatattcatgatgtg
gagtggaagttcaggcatatcttccgaggccaacccaagagacacctgctgactactggc
tggagtgtgtttgtcagtgctaagagactcgttgctggagattctgtgctattcatatgg
aatgagaagaaccaacttttgcttggaatcagacacgccagccggccacagactgtaatg
ccctcttctgttctttctagtgacagcatgcatatcggcctccttgcagcagcagctcat
gctgctgcaacaaacagccgattcacaattttctataatcccagggcaagtccatcagaa
tttgttatacccctttcaaagtacatcaaggctgttttccacacccggatatcggttggg
atgcgattcaggatgttgtttgagaccgaggaatctagtgtccgcaggtacatggggacg
ataacagaagtaagtgatgcagacccagtgcgctggcctagttcctattggagatcggta
aaggttggttgggatgaatcaacagcaggagaaaggcctcctagagtttctctgtgggaa
attgaacccttgacaacctttccaatgtatccatctctgttcccactgcgagttaagcat
ccttggtattctggagttgctgctcttcatgatgaaagcaatgctttaatgtggctgaga
ggagttgctggtgaaggaggctttcagtctttgaacttccagtcacctggtataggttcc
tggggacaacagcgactccatccatccttacttagcaacgaccacgatcagtatcaagca
gtggttgctgccgcagctgcctcccagtctggtggttatctgaagcagcaattcctacac
cttcaacaacctatgcagtcccctcaggaacagtgcaacctcaatccgctgttgcagcaa
caaattatgcagcaagcgagccaacagcaactagttagtcctgattctcaaaacatgcag
tctgtgctcagcccaagttctatccagcagcagcttcaccaactccagcaaatgcagcat
gctcataatgatcagaagcagaagattcaaccggatcaaccttatcaagttcctagcagt
gcggttctccctagcccaacgtcactaccaagccacttgcgtgaaaaatttggattctct
gatcctaatgtgaactcttccagctacatcagctctagcatccacgaaaacatgttggaa
tcgaattttcttcagggtagctcgaaatgtgtggacttgtctagattcaaccaaccatta
gttagcgagcagcagcagcagcaggcgtggaagcaaaagtttatgggttcacaatcaatg
tcttttgggggctcgggttcgcttaactcacccactagcaaagatggttctgttgacaac
aaagttggccatgatgggcagaaccagtccctttttagccctcaagttgacaattcttcc
ctactgtacaatatggtacctaatctgacttcaaatgttgcggataacaatatatcagcg
attccatctggatcaacatatctgcaaaatccgacgtacggttgtctggatgactcttct
ggtttattgcaaaatacaggagagaatgatccaactactagaaccttcgttaaggtttac
aagtcaggatcggtggggaggtcattggacatcacccggttctctaactatgctgaactt
cgagaggaactaggtcagatgttcggcattaagggtcagttggacgaccctgatagatca
ggctggcagcttgtatttgtcgacagggagaatgatgtgcttctccttggagacgacccg
tgggagtcatttgtgaatagtgtatggtacatcaagatactttcacctgaggatgtgcat
aagatgggaaagcaaggaaacgatccacgctacctatcttaa
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