Panicum virgatum (switchgrass): 120642901
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Entry
120642901 CDS
T07260
Name
(RefSeq) probable amidase At4g34880
KO
K01426
amidase [EC:
3.5.1.4
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00330
Arginine and proline metabolism
pvir00360
Phenylalanine metabolism
pvir00380
Tryptophan metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
120642901
00360 Phenylalanine metabolism
120642901
00380 Tryptophan metabolism
120642901
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.4 amidase
120642901
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Motif
Pfam:
Amidase
XPC-binding
Motif
Other DBs
NCBI-GeneID:
120642901
NCBI-ProteinID:
XP_039775421
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Position
7K:13014430..13017717
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AA seq
508 aa
AA seq
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MACLRLLLAFSAIALAAGGACGFQFEEATVDSIHRGFKNGSLTSAALVRYYLGQIARLNP
QLHAVIEVNPDALRDAARADAERASGHRRAAAGGLHGVPVLIKDLIATRDRLNTTAGSFA
LLGSVARRDAGVVARLRRAGAVVLGKSNLPEWGNFRNAAGLDGWSARGGQAMNPYVLEVD
PCQASTGSAIAAAANMAAVTLGTETMASILCPASVNSVVGIKPTVGLTSRSGVIPFTLRQ
DTVGPLCRTVADAVHVLDAIVGYDALDAAATRAASKYIPTGGYKQFLKAGGLRGKRIGIP
NGFFGFKNGTVKHRVCKQHIDTLRRHGATVIENLDIANLSVIQNITKSGFQAAAPAEFKF
NLNNYLSNLSYSPVRSLAEIIAFNNAHPVEEKLKKYGQQLLLLSESTTGIGPRERAAIHQ
MNELSANGVEKLMKKHRLDAIFTPDSSIATVLAYNGLPGIEVPAGYDEKGVPFGICFGGL
KGYEPRLIEMAYAFEQATKVRKPPMIKA
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggcttgcctgcgattgctgctcgcgttctccgccatcgcgctagccgccggtggcgcg
tgcggcttccagttcgaggaggccaccgtcgacagcatccaccgcggcttcaagaatggc
agcctcacgtcggcagcgctcgtccgttactacctcggccagatcgcccggctcaacccg
cagctccacgccgtcatcgaggtcaaccccgacgcgctccgcgacgcggcccgcgccgac
gccgagcgggcgtccgggcaccggcgagccgccgccggagggctccacggcgtccccgtg
ctgatcaaggacctcatcgcgacgcgcgacaggctcaacacgacggccgggtcgttcgcg
ctgctcggctccgtggccaggcgcgacgccggcgtggtggccaggctgcgccgcgccggc
gccgtcgtgctcggcaagtccaacctccccgagtggggcaacttccgcaacgccgccgga
ctggacggctggagcgcgcgcggcggacaagccatgaatccgtacgtgctggaggtggat
ccctgccaagcgagcaccggctcagccatagccgcggcggcgaacatggcagcggtgacg
ctggggacggaaaccatggcttccatactctgcccggcgtcggtgaattcggtggtcggc
atcaagcccacagttgggttgacaagccggtccggcgttatccccttcactctgaggcag
gacactgtcggaccactatgtcgcacggtagcagatgctgtccacgtgctggatgctatt
gttggttatgatgccctggacgctgcagcaacaagggcagcatccaagtacatccctact
ggcggatacaagcagttcttgaaggccggcgggttacgaggcaagagaattggtatacca
aatggctttttcggtttcaaaaatgggacagtgaagcatagagtgtgcaagcagcacatc
gacacactgaggcgacatggagcgactgtgattgagaacctggacatagcaaatttgagt
gtcatacagaatatcactaaaagtggattccaggctgcggcaccagcagagttcaagttc
aacctgaacaattacttgtctaatttgtcatactctccggtccgttcccttgctgaaatc
atagcattcaacaatgcacatcctgtcgaggagaagctgaaaaagtatgggcagcagctt
ttgctgttatctgaaagcaccaccggcattggcccacgggagagagctgcaatacatcag
atgaatgagttgtcggcaaatggggtggagaagctgatgaagaaacaccggcttgatgca
attttcacacctgattcgagtatcgccaccgtccttgcgtacaatggtctccctggcatc
gaggtgccggctgggtatgacgagaagggtgtcccctttggcatttgtttcggcgggctc
aagggttatgaaccaaggctgatcgagatggcctatgcgtttgagcaggcaactaaggtg
cgaaagcctcctatgataaaagcttag
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