Panicum virgatum (switchgrass): 120643056
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Entry
120643056 CDS
T07260
Name
(RefSeq) transcription factor MYB80-like
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120643056
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120643056
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_CHD1_Hrp3
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
120643056
NCBI-ProteinID:
XP_039775525
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All DBs
Position
7K:complement(36018043..36019532)
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AA seq
353 aa
AA seq
DB search
MGRVPCCEKDNVKRGQWTPEEDNKLLSYITQYGTRNWRLIPKNAGLQRCGKSCRLRWTNY
LRPDLKHGEFTDAEEQTIIKLHSVVGNRWSVIAAQLPGRTDNDVKNHWNTKLKKKLSGMG
IDPVTHKSFSHLMAEIATTLAPPQVAHLAEAALGCFKDEMLHLLTKKRPTDFPSPAVPAM
PGIAAPCGFPAPPPQQQQQPDDTIERIKMGLSRAIMSDPGATADKQQQQQQPPWTPADMP
EGLAGMFAAYNPAAHGQEEFRCDNGMVLGGAGREPDRGTSMWSHQSLYSGSSGTEPAARS
APPALPERGNDSVGSSGGDEEADGGKGGSDMSSLFGSDCVLWDLPDELTNHMV
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcgtcccgtgctgcgagaaggacaacgtgaagcgcgggcagtggactcctgag
gaggacaacaagctgctctcctacatcacgcagtacggcacacgcaactggcgcctcatc
cccaagaatgccgggctgcagcggtgcggcaagagctgccggctccggtggaccaactac
ctgcggcccgacctgaagcacggcgagttcacggacgccgaggagcagaccatcatcaag
ctgcactcggtcgtcggcaaccggtggtcggtgatcgcggcgcagctgccggggcgcacg
gacaacgacgtcaagaaccactggaacaccaagctcaagaagaagctgtccgggatgggc
atcgaccccgtcacccacaagtccttctcccacctcatggccgagatcgccaccacgctc
gcgccgccgcaggtcgcgcacctcgccgaggccgcgctggggtgcttcaaggacgagatg
ctccacctcctcaccaagaagcgccccaccgacttcccctcgcccgccgtgcccgccatg
cccgggatcgccgcgccctgcggcttccccgcgccgccgccgcagcagcagcagcagccc
gacgacaccatcgagcgcatcaagatgggcctgtcccgcgccatcatgagcgaccccggc
gccaccgccgacaagcagcagcagcagcagcagccgccttggacgccggccgacatgccc
gaggggctggcggggatgttcgccgcgtacaaccccgccgcgcacggccaggaggagttc
cggtgcgacaacgggatggtcctcggcggcgccggccgcgagccggaccggggcacatcg
atgtggagccaccagagcttgtacagcggcagctcgggcaccgagccggcggccaggtcg
gcgccgccggcattgccggagagaggcaacgacagcgtcggcagcagcggcggcgacgag
gaggcggacggcgggaagggcggctccgacatgtccagcttgttcggatccgactgtgta
ctctgggatttgcctgacgagcttacaaatcacatggtgtaa
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