Panicum virgatum (switchgrass): 120643377
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Entry
120643377 CDS
T07260
Name
(RefSeq) SAM50-like protein SPAC17C9.06
KO
K07277
outer membrane protein insertion porin family
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pvir03029
]
120643377
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120643377
Mitochondrial biogenesis [BR:
pvir03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
120643377
Transporters [BR:
pvir02000
]
Other transporters
Pores ion channels [TC:
1
]
120643377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
Motif
Other DBs
NCBI-GeneID:
120643377
NCBI-ProteinID:
XP_039775664
LinkDB
All DBs
Position
8K:complement(681793..695530)
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AA seq
511 aa
AA seq
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MATASNTTHSPPSIIPHQQDEDDDDLDDEADDEPSASPSEEARHEAVLRRLTADEVRIRV
YQVTIRGCARTRRAAVEAAVGPDLARAATVRDLVRAAAAAGDRLRRLGAFDTVSITLDAA
PSGIPGSAVVVLVDVAEARGRAAAGFGVFANTQTRSCSLEGSLKLKNLFGYCETWDAAGA
LELDKTTELSAGVEMPRIGAIPTPLVARISFLSEDWLKSSLKEHLMGVSVGLLSTMSHNL
SYNLTWRKLTDPARMSSNSVQEQLGHSLLSSVKYAYTVDQRDSSIRPTRGYAFLSSSQVG
GLAPGSRYSRFLRQEFDLRVALPLGVLNGALNAGVAAGVIHPLERGSTGSVSPLSERFYL
GGNRSLVCRLGGPSSLLGFKTRGLGAREFRVCNPNNSENGSSSCPELIGLGGDIAVAAFA
DLSFDIPLKPLRDLGIHGHAFVCAGNLGKLTECDLRKFPLTDFLQTFRSSAGFGVVLPTR
LFRIEVNYCHILKQFDHDKGKTGIQFNFASP
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgcatccaacaccacccactcgcctccttccatcatcccccaccaacaggac
gaggacgacgacgacctcgatgacgaagccgacgacgagccctccgcgtccccgtccgag
gaggcgcgccacgaggccgtgctccggcggctcaccgcggatgaggtccggatccgggtg
taccaggtcacgatccggggctgcgcccgcacgcgccgcgccgcggtcgaggccgcggtg
ggcccggacctcgcgcgcgccgccaccgtgcgagacctcgtgcgcgccgccgccgcggcc
ggcgaccgcctccggcgcctcggcgccttcgatactgtctccatcacgctcgacgcggct
ccgtcagggatccccggcagcgccgtcgtcgtacttgttgacgtcgcagaggcccgcggc
cgcgctgccgctggattcggcgtcttcgccaacacccagactcgatcgtgttcacttgaa
ggttcactgaagttgaagaacctatttggatactgtgagacctgggatgcagcaggtgct
cttgaattagataagacaacagaactaagtgctggagtggaaatgcctagaatcggagcg
ataccaactccgctggtggctagaatatcatttctgtccgaggactggttgaagtcctca
ctcaaagaacacctgatgggcgtttctgttggcttgctctccaccatgagccacaacctt
tcttacaatttgacatggcgaaaattaactgatccagcacgcatgtcatccaattctgta
caagaacagttaggacatagccttttgtcctctgttaagtatgcatacacggttgaccaa
agggactcgagcataaggcctacacgtggatatgcttttctctcgtcttctcaagtagga
ggtcttgcaccagggagcagatattcacggtttcttagacaggaatttgatcttcgagtg
gctttgcctctgggtgtgcttaatggtgctctcaatgccggagttgcagcaggagtcatc
catccattggaaaggggttccacgggatctgtgtcaccactttcagaaaggttttacttg
ggaggtaacaggtcccttgtatgccgcttgggtggaccatcatcactcttaggattcaaa
acaagaggactaggagcaagggagttcagggtctgtaaccccaacaattctgaaaatggt
agttccagttgtcctgagctaattggtcttggtggtgacatagcagtggcagcatttgcg
gacctctcctttgatatacctctgaagccactcagggatctaggaattcatggccatgca
tttgtctgtgctggaaatcttggtaaattaactgagtgtgatttacggaaatttcccctt
accgacttcctacaaacgttcaggagttctgccggatttggtgtagtcctgccaaccaga
ttgtttcgcatagaggtaaattactgccacatcctgaaacaatttgaccatgacaaggga
aagacaggcatacagtttaactttgcttcaccctaa
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