Panicum virgatum (switchgrass): 120643399
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Entry
120643399 CDS
T07260
Name
(RefSeq) regulatory-associated protein of TOR 1-like isoform X1
KO
K07204
regulatory associated protein of mTOR
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
120643399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120643399
Membrane trafficking [BR:
pvir04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
120643399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Raptor_N
WD40_CDC20-Fz
WD40_Prp19
WD40
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Lgl_C
Motif
Other DBs
NCBI-GeneID:
120643399
NCBI-ProteinID:
XP_039775689
LinkDB
All DBs
Position
8K:complement(849584..859675)
Genome browser
AA seq
1416 aa
AA seq
DB search
MYVTKLPDLTSSWLPAEGDKQETHPASMALGDLMASRLVHSSSSPSPSPSPSMAAPTPPL
PNHHHNHVTDDLPVANGPEPRNGLEVAEVEKPAPVVYLPQVVVLCEQRHERIDEAAAAAG
PSTSGLVSKWRPKDRMKTGCVALVLCLNISVDPPDVIKISPCARMECWIDPFSMAPPKAL
ENIGKTLHSQYERWQPKARYKLQLDPTVEEVKKLCNTCRRYARSERVLFHYNGHGVPKPT
TNGEIWVFNKSYTQYIPLPITDLDSWLKTPSIYVFDCSAAGIIVKAFLERLDWSSSSSSS
SQKDCILLAACEAHQTLPQSAEFPADVFTACLTTPIKMALHWFCKRSLLRGSMDHSLIDQ
IPGRQNDRKTLLGELNWIFTAITDTIAWNVLPHDLFQRLFRQDLLVASLFRNFLLAERIM
RSANCSPISYPLLPPTHQHHMWDAWDMAAEICLSKLPQLIADPNAEFQQSPFFTEQLTAF
EVWLDHGSEDKKPPEQLPIVLQVLLSQSHRFRALVLLGRFLDMGPWAVDLALSVGIFPYV
LKLLQTSAMELRQILVFIWTKILSLDKSCQVDLVKDGGHAYFIRFLDSLDAYPDQRAMAA
FVLAVIVDGHRTGQEACIHACLIDVCLRHLQPENPHDAQTEPLLLQWLCLCLGKLWEDFA
EAQLLGLQSNAPEILIYLLSEPQPEVQCLHISSVLSFASFTIYLLNIWSCQVRASAVFAL
GNLLDMGSTSSNGADDDSDDDEKVKAEINVVRSLLQVSSDGSPLVRCEVAIALTRFALGH
NKHLKSVAAEYWKPQTNSLLKSPPSLANISSPNNVYSPNNIRQGSSGLASHIGPVLRVGS
DSSATGRDGRVSTSSPIAASSILHGSPQSDDSSQHSDSGILLRDNASNGGLSYTRSRPAD
SVVYSQYISTMCSVAKDPYPRIATIGRRALSLIGVKQVVMKNSRFNSGGAHQGETSAPPS
NFGMARSSSWFDMNSGNFSITFRTPPVSPPQHDYLTGLRRVCSMEFKPHPMNSPEGLADP
LLSSAAAPSNADLSILPKSTIYNWSCGYFSRPLLTGSDDNEEAHARREERGQITLDCIAK
CQRSSACKMTSQIASWDTRFDSGTKAALLLPFSPIVIAADENEQIRVWNYDDALPVNSFQ
NHKLSDRGLSKLLLINELDESLLLAASSDGNVRIWKNFTQKGGQKLVTAFSSVQGHRAAG
RSIVIDWQQQSGCLYASGDMSSILVWDLDKEQLLSTIQSSGDSAISALSASQVRSGHFAA
GFADGSVRIFDVRSPDRLIYMARPHAPRTEKVVGIGFQPGFDPYKIVSASQAGDIQFLDV
RRAAEPYLTIEAHRGSLTALAVHRHAPVVASGSAKQMIKVFSLEGEQLTIIRYQPSFMGQ
RIGSVNCLSFHPYKSLLAAGAGDNALVSIYAEENYK
NT seq
4251 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtgaccaagctccccgacctcacctcgtcatggctgccggctgagggggataag
caggagacacacccagcgtccatggcattgggagatctcatggcgtccaggctcgtccac
tcctcgtcctcgccgtccccatcgccgtcgccatcgatggccgcgcccacgccgccgctg
ccgaatcaccaccacaaccacgtcacggatgacctccccgtcgccaacggtccggagccc
aggaatgggctggaggtcgccgaggtggagaaaccggcgcccgtggtgtacctgccccag
gtggtggtgctgtgcgagcagcgccacgagaggatcgacgaggctgctgccgccgccggg
ccctccaccagcggcctcgtctcaaagtggcgcccaaaggaccggatgaagactggatgt
gttgcccttgtattatgtttgaacattagtgttgatccaccagatgtaattaaaatctcc
ccttgcgcaagaatggagtgctggatagatccattttctatggcacctcctaaagccctt
gaaaatattggaaaaactttgcactcacagtatgagcgctggcaacctaaggctcgttac
aagcttcagctagatccaactgtggaggaagttaagaagctttgtaatacttgccgcaga
tatgccagatcagagagagtccttttccattacaatggccatggtgtaccaaagcctaca
actaatggtgagatttgggtgtttaacaagagttacacgcagtatattccacttccgatt
actgatcttgattcttggctaaaaacaccttccatttatgtttttgactgctcagcagct
ggaattattgtgaaagcttttctagagcgcctagactggagttccagctcctcttcgtct
tcgcagaaggattgcattcttcttgctgcctgcgaagcacatcaaacacttccccagagt
gcagaatttcctgctgatgtgtttacggcttgccttacaacacccatcaagatggcattg
cactggttttgtaagagatcattactccgtggttctatggatcattctcttattgaccaa
attcctggaaggcaaaatgaccgtaaaactcttcttggagaactgaattggattttcact
gccattacagacactattgcatggaatgttcttcctcatgatctattccaaaggcttttc
aggcaagatcttctggttgctagtctcttccgtaacttcctgcttgctgagagaatcatg
cgatctgcaaattgttctccaatttcttatccgttgttaccaccgacacatcaacaccat
atgtgggacgcatgggacatggctgctgagatttgcctttccaagcttcctcagttaatt
gctgatccaaatgcagagtttcagcaaagcccttttttcacggaacaactgacggctttt
gaagtgtggcttgatcatggttctgaggacaagaagccccctgaacaattacctatagtt
cttcaggtcctgcttagtcaatcacatagattcagagcgcttgttttgcttggaagattt
cttgacatgggaccatgggcagttgatttggccctgtctgttggaatctttccttatgtg
ctcaaactgcttcaaacaagtgcaatggagttgcgtcaaattcttgtgttcatatggacg
aaaattctatctcttgataagtcgtgccaggtggacttggttaaagacggaggacatgca
tattttatcaggtttcttgacagtttggatgcttacccagatcagcgtgcaatggccgct
ttcgttttagcagttattgtggatgggcataggacgggtcaagaggcctgtattcatgca
tgtcttatagatgtttgtctgagacatctgcaacctgaaaatccccatgatgcacagaca
gagcctttgcttttgcagtggctttgtttatgccttggcaaactctgggaagattttgct
gaggctcagttacttggtctgcaatcaaatgcaccagaaattttaatttatttgttatcg
gagccccaacctgaggtacaatgccttcatatttcatctgttctttcctttgcttccttc
acaatatatttattaaatatttggtcttgccaggtcagagcttctgctgtttttgcactt
gggaatcttctggatatgggatcaacatcatcaaatggcgccgatgatgattctgatgat
gatgaaaaagtaaaagctgaaataaatgtcgttcgaagccttctgcaggtttcttcagat
ggtagcccccttgttagatgtgaggttgctatagcgcttactcgttttgcattgggtcac
aataagcatctcaaatctgttgctgctgagtattggaaacctcaaaccaattcattgctg
aagtcacctccatcactggccaatataagtagtccaaacaatgtctacagtcccaacaac
attcgacaaggcagcagtggtcttgcttctcatattggtcctgtgctaagggttggcagt
gatagcagtgccactggtcgtgatggaagggtttctacgagcagcccgattgcagcaagt
agcatcctgcatggctctccccagtcagatgattcttcccaacactctgattcaggcata
ttactgagagacaatgcaagtaatggtggcctcagctacactagatcgaggcctgctgac
agtgtcgtttattctcaatatatatcaactatgtgttctgttgctaaagatccttaccca
agaattgcaactattggtcggagagcactgtcccttataggtgtcaagcaagtggtcatg
aaaaacagtagatttaacagtggaggtgcacatcaaggggagacatctgcacctccatca
aactttggaatggcacgctcttcttcctggtttgatatgaattctggaaacttctcaatt
acatttaggacgcctcctgttagcccccctcaacatgattatcttacaggattacgccga
gtgtgttctatggagttcaaaccacatcctatgaattctcctgagggcttagctgatccc
cttttgagctctgctgcggctcccagtaatgctgatctaagcatacttcccaaatcaaca
atttacaactggagttgtggatacttctctaggccacttttaactggttctgacgataat
gaagaagcccatgctagaagagaagagagaggacaaattacactagattgcattgctaag
tgccagagatcatcagcttgcaagatgacaagccaaattgctagttgggatacaaggttt
gattcaggtacaaaagcagcattgttgttgccattttctccaatcgtcattgcagctgat
gaaaatgaacaaataagagtttggaactacgatgatgcactacccgtgaactcttttcaa
aaccataaattgtccgacagagggctatcgaaactcttgcttatcaacgagcttgatgag
agcttgcttttagctgcctcaagtgatggaaatgtacgtatatggaaaaattttactcaa
aagggaggacaaaaacttgtaactgctttctcatcagttcagggtcatcgagctgctggt
cgcagtattgtgatcgattggcagcagcaatctggttgcctgtatgcatctggtgacatg
tcttccatcttggtatgggatcttgacaaggaacaacttctcagcaccattcagtcatct
ggtgacagtgcgatttctgccctctctgcatctcaggtccgctctggacactttgctgct
ggttttgctgatggttctgtcaggatatttgatgttcgctctcctgatagactgatctat
atggcaaggccacatgccccaagaacggaaaaggttgtgggcatagggtttcagcctggg
tttgatccatacaagattgtaagtgcatctcaagctggagacattcagtttctggatgtt
agaagagcagcagaaccctacctgactattgaggcacacaggggttcacttaccgcttta
gctgttcatcggcatgccccagttgttgctagtggctcagccaagcagatgattaaagtg
ttcagtcttgaaggagagcagttgacgataattcgctaccagccatcatttatgggccaa
agaataggcagtgtaaactgcctttctttccacccgtacaaatcactcttggccgctggt
gctggtgataatgctcttgtctctatctatgccgaggaaaattacaagtaa
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integrated database retrieval system
