Panicum virgatum (switchgrass): 120643510
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Entry
120643510 CDS
T07260
Name
(RefSeq) calcium-binding protein CBP-like
KO
K13448
calcium-binding protein CML
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120643510
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Motif
Pfam:
EF-hand_7
EF-hand_6
EF-hand_5
EF-hand_1
EF-hand_8
AIF-1
Motif
Other DBs
NCBI-GeneID:
120643510
NCBI-ProteinID:
XP_039775827
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Position
8K:complement(2636161..2638429)
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AA seq
310 aa
AA seq
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MAGYPPPASGYPYGPGAGGAGGYGAPPPYGSSPAPSAPPYGDKPPKEGKTSSSSSAPPNY
GAPPSSQPYGGGGGGYGAPYGAPPPSSAPPYGAPPPSSAAPYGAPPHAPAPYGAPPPAYG
GGYGGSPFASLVPSAFPPGTDPNVVACFQAADRDGSGMIDDKELQSALSGYNQSFSLRTV
HLLMYLFTNTNVRKIGPKEFTSVFYSLQNWRAIFERFDRDRSGKIDSSELRDALLSLGYS
VSPTVLDLLVSKFDKTGGKSRAIEYDNFIECCLTVKGLTEKFKEKDTAYSGSAAFTYEAF
MLTVLPFLIA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggccggctacccgccgcccgcctccggctacccctacggccccggcgccgggggtgcc
ggaggctacggcgccccgccgccctacggctcctccccggccccctccgccccgccctac
ggcgacaagccccccaaggaaggcaagacctcctcctcctcctccgcgccgcccaactac
ggcgccccgccctcctcccagccctacggcggcggcggcggaggctacggcgcgccctac
ggcgccccgccgccctcgtccgcccctccctacggcgccccgccgccctcgtccgccgct
ccctacggcgcgccgccgcacgcgcccgcgccctacggggccccgccgccggcgtacggg
ggcggttacggcgggagccccttcgcgtcgcttgtgccgtccgcgttcccgcccgggacc
gaccccaacgtggtggcctgcttccaggcggcagaccgcgacggcagcgggatgatcgac
gacaaggagctgcagtccgcgctctccggttacaaccagagcttcagcctccgcaccgtc
cacctccttatgtacctattcaccaacaccaacgtccgcaagatcgggcccaaggaattt
acttctgtgttttacagtcttcagaattggagagcaatatttgaaagatttgaccgtgat
cggagtggtaagattgactcatcagaactgcgtgatgctcttctcagtctgggatattcc
gtctctccaactgtgctagacctgcttgtgtctaaatttgacaagactgggggcaagagc
agagcaattgaatatgataacttcattgaatgttgcctcactgttaagggactgactgag
aagttcaaggagaaggacaccgcatactccgggtctgcggcatttacttatgaggctttc
atgctgaccgtgctccctttcctcatcgcctag
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