Panicum virgatum (switchgrass): 120643532
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Entry
120643532 CDS
T07260
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 2-like
KO
K13109
IK cytokine
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvir03041
]
120643532
Spliceosome [BR:
pvir03041
]
Complex B
Other components
Complex B specific factors
120643532
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Gene cluster
GFIT
Motif
Pfam:
RED_N
RED_C
Motif
Other DBs
NCBI-GeneID:
120643532
NCBI-ProteinID:
XP_039775857
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Position
8K:complement(2892544..2899503)
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AA seq
564 aa
AA seq
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MSSKKNYYKEKMMRRKEEKKEEPETPRYRDRAKERREDQNPDYEPTELGSFHAVAPPGTD
LRLADAHKISIEKSKYLGGDLEHTHLVKGLDYALLHKVRSEIEKKPDAEDEKEAKSRATK
DQAVSFRTATAKSVYQWIIKPQSIIKENELFLPGRMSFLYNMEEGLTNDIPTTLHRSKAD
CPVPEEMVTVSVDGSVLDRIAKIMTYLRLGSSGKVLKKKKKERDTKGKSNFASGNCDEAV
KPSQTSSSALKHQSEKNMPPPPPPPPPPRNNDSNGKEKQSRADNDDIFVGDGVDYSVPNK
EMSQSPISEDMEESPRNHQKQSYFTEPMYGPVPPSEPAQAWQQPNGYGTVQAQMVAAGYQ
GDWSGYVYAEQQLGYPEQYVQHSTQEYDVLADPSIAQDPRFMTQADKDRGLGSVFKRDDQ
RLNQLREKDAREKDPNFISDSYSECYPGYQEYHNEIAGSDDEDDLSKMDMGGRAKGRLHR
WDFETEEEWAKYNDQKEAMPKAAFQFGVKMQDGRKTRKQNKDQKLTNDLHKINKILARKK
GEKDGTDDGSHYDDDLPSAKKQRG
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgaagaagaactactacaaggagaagatgatgcggcggaaagaggagaaaaaa
gaagaaccagagacacccaggtatcgtgatcgtgctaaagagcgtcgtgaagatcaaaac
ccagactatgaacctacagagcttggttcatttcatgctgtggcacctcctgggacagat
ttgaggctggctgatgcacacaagatttcaattgagaaaagcaaatacctaggaggtgat
ttggagcatacacatctggtcaaaggcttggactatgctctacttcacaaagtacggagt
gaaattgaaaagaaacctgatgcagaggatgagaaggaggcaaagtcaagggcaacaaaa
gatcaggctgtctccttccgaactgcaactgcaaagtctgtctaccaatggatcataaag
ccacaaagcataataaaagagaacgaattgtttctccctggtcggatgtcatttctttac
aatatggaggagggactcaccaatgacattccaacaactcttcataggagcaaagctgat
tgccctgttccagaggagatggtaactgtcagtgtggatggttctgtacttgacaggatt
gctaaaattatgacataccttcgacttggatcttcagggaaggtcttaaagaaaaagaaa
aaggaaagagacacaaaagggaagagcaattttgcgagtggtaactgtgatgaggcagta
aaaccttcgcaaactagcagttctgctctgaaacaccaatcagaaaagaatatgccgcca
ccgccaccgccaccgccaccccctcggaacaatgattccaatggaaaggagaaacaatct
agggctgacaacgatgacattttcgttggtgatggagttgactattctgttcctaacaag
gaaatgagccagagccctatttctgaggatatggaggaatccccacgtaaccatcagaag
cagtcttatttcacagaacccatgtatggccccgtaccaccatctgaacctgcacaagct
tggcaacagccgaatgggtatggtactgttcaagcccaaatggtagcagctggatatcaa
ggcgattggtcaggctatgtgtatgcagaacagcagttgggttatccagaacagtacgtg
caacatagcacacaggaatatgatgtgttagctgatcctagtatagcccaggatcctagg
ttcatgactcaagcagataaggatcgaggtctaggttctgttttcaaacgtgacgatcaa
aggcttaatcagctaagggaaaaagatgcacgggagaaagatccaaactttatttcggat
agctactcagagtgttatcctggttatcaggagtaccataatgagattgcagggagcgat
gatgaagatgatttatcaaagatggatatgggtggacgggctaaggggcgtctacatagg
tgggactttgagacggaagaggagtgggcgaaatacaacgatcagaaagaagccatgccg
aaggccgccttccagtttggggtgaagatgcaggacggcaggaagaccaggaagcagaac
aaggaccagaagctcactaatgatctccacaagatcaacaagatccttgctaggaagaag
ggtgagaaagatggaacagatgatggcagccattacgatgatgatttacctagcgcgaag
aagcaacgcggctga
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