Panicum virgatum (switchgrass): 120643536
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Entry
120643536 CDS
T07260
Name
(RefSeq) protein TRAUCO-like
KO
K14964
Set1/Ash2 histone methyltransferase complex subunit ASH2
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120643536
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
120643536
MLL-HCF complex
120643536
MLL3/MLL4 complex
120643536
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
Motif
Other DBs
NCBI-GeneID:
120643536
NCBI-ProteinID:
XP_039775859
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Position
8K:2867523..2870069
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AA seq
323 aa
AA seq
DB search
PYRRRRRPVRSRRRRAVTASGPGQPPARARRRPSSRAAPATAPAAAAALAPTPGPAGGDE
LCQLVPATRLAAERNDDAAAQPVLLSRFFKSERIEVSDDRLTAASTKGYRMVRATRGVAA
GAWYFEVRFVHLGATGHTRLGWVTNRADLQTPVGYDAYGFGYRDMDGTKVHKAWRDKYAD
EGYGEGDVLGFYISLPDGEQYEPKQPDLIQHKGMPFHVQVPKEEQKIPAPVPGSEICYFK
NGVCQGSAFKDIPGGRYYPAASMYTRPKESNCVVKFNFGPDFEFFPQDFGGLPIPQPVSE
VPYQALEVKNEGPVENGIAEKTC
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
ccctatcgccgccggcggcggccagtaagaagtcgaagaagaagggcggtaacagcgtct
ggacccggccaacctcccgcaagggcaagaagaaggccaagcagccgggcggccccggcc
acggccccggcggcggcggcggcattggcgcccaccccgggcccagccggcggggacgag
ctgtgccagctcgttcccgcgacccgcctcgccgccgagcgcaacgacgacgcggccgcc
cagcccgtgctcctctcccgcttcttcaagtccgagaggatcgaggtctccgacgaccgc
ctcaccgccgccagcaccaagggctaccgcatggtgcgcgccacccgcggcgtggcggcc
ggggcgtggtactttgaggtcaggttcgtgcatctgggcgccactggccacacgcgcctt
ggatgggtgaccaacagagcggacctccagacgccggttgggtacgacgcctatgggttt
gggtaccgcgacatggatggcaccaaggtgcataaggcttggagggacaagtatgctgat
gaagggtacggggaaggagacgttctcgggttctacatttctctgcctgatggggagcag
tatgagcctaagcaacctgacctgattcaacacaagggaatgccctttcatgtgcaagtg
cccaaggaggagcaaaagataccagctcccgttcctgggagtgagatatgctacttcaag
aatggggtatgccaaggcagtgccttcaaggacattcctggagggaggtattacccagct
gcatcaatgtatacacgccctaaggagtcaaactgtgtagtaaaattcaattttgggcca
gactttgagttcttcccacaagattttggtggcctgccaatccctcaaccagtgagtgag
gtgccttatcaggcacttgaggtgaagaatgaggggcctgttgaaaatggtattgctgaa
aaaacttgctag
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