Panicum virgatum (switchgrass): 120643597
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Entry
120643597 CDS
T07260
Name
(RefSeq) DNA-3-methyladenine glycosylase-like
KO
K03652
DNA-3-methyladenine glycosylase [EC:
3.2.2.21
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120643597
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvir03400
]
120643597
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
120643597
DNA repair and recombination proteins [BR:
pvir03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
120643597
Prokaryotic type
120643597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pur_DNA_glyco
Motif
Other DBs
NCBI-GeneID:
120643597
NCBI-ProteinID:
XP_039775934
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All DBs
Position
1K:complement(53129921..53132501)
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AA seq
256 aa
AA seq
DB search
MTTSGAPTPPRFKRSSPRKKSQLRSRRLTAGEAEAAGGPASARAPLPSPLEVDAVPRIGR
ALPQEFFEVDALVLAPRLLGKLLRRDEVILRITEVEAYRPNDSACHGRFGITARTAPVFG
PAGHAYVYLCYGLHMMLNVVADMEGVGAVVLIRSCSPVTGLETLQRRRGQQTEKPILLTG
PGKVGQALGLSTDWSNHPLYTPGGLEVLDGSEPEAILVGPRVGIDYASPKHVAAPWRFAI
AGTPWISAPKNTLRPR
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgaccacctccggcgcgcccacgcccccacgcttcaagcgctcctcccccaggaagaag
tcccagctaaggagccgccgcctcaccgccggagaggccgaggctgctgggggcccggcg
tcggcgagagcgccacttccctcaccgctggaggtggacgcggtgccgcgtattgggcgc
gcattgccgcaagagttcttcgaggtggatgccctcgtcctcgccccccgcctcctaggc
aagctactgcgccgcgacgaagtcatccttcgcatcacagaggtggaggcctacaggcca
aatgattccgcatgccatggccggttcggcatcacggcgaggactgctccagtgtttgga
ccggctggccatgcatatgtttatctatgctatgggctccacatgatgctcaatgttgtt
gctgacatggagggtgttggtgctgttgttttgatccggtcatgttctccggttaccggt
cttgaaactcttcagcggcgccgaggtcaacaaacagagaaaccaattctacttacagga
ccaggaaaggttggacaagctctgggcctatccactgattggtcgaatcatccactttac
acacctggtgggttggaagtgttggacgggtcagagccggaggccattctggttggtccc
cgtgtgggcatcgattacgcgtctcccaagcatgtcgcggcgccgtggaggttcgccatt
gccggaactccgtggattagcgcccccaaaaatacccttcggccacgctga
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