Panicum virgatum (switchgrass): 120643638
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Entry
120643638 CDS
T07260
Name
(RefSeq) two-component response regulator-like APRR9
KO
K12130
pseudo-response regulator 5
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
120643638
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GFIT
Motif
Pfam:
Response_reg
CCT
Jas_motif
Motif
Other DBs
NCBI-GeneID:
120643638
NCBI-ProteinID:
XP_039775986
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Position
8K:4589045..4593971
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AA seq
688 aa
AA seq
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MSPDADAAVASAGGGGGGGGEAAGASPSPASAAAVRWDQILPRRSLRVLLVEHDDSTRQV
VTALLRKCGYRVAAVADGMKAWEVMRGRAYAFDLVLTEVAMPSLSGIQLLARIVAADECK
NIPVIMMSSQDSIGTVLKCMQKGAVDFLVKPVRKNELRNLWQHVWRRHAMNSQINGSENN
AASNHISANVANVSKAGENSDEESDAQSFGSKRETEIQSIEKLPDTRADEGAGSSRKSKL
QNESYDGVNTKLHVSKDSDDAPSVSEKNVRSKGLNGITSAKVAEQIMDNALRIADASSRR
PSNLGKDLAMAQPTADGQCKSSVVERNAPTESSLGEKSKGAAISNAKSCPSQFLETNQHH
LSGYKIQEFREKDIFNHSNSSAFSRYGNKRIEPSAEHQFFPSHCITRQEPVHDKDPVSQP
SGVLPPHEHNSGESRRQAHIPLDSSTEGAAVLCSSSAREDVGASSSSHRQDNMSHPSYGF
IPLPIPVGAAMPYHYGAILQPVYYPQAPRMHCDSGGINKAAIQHASGQLNYHENRSIPSQ
VDEHKQSEENQQLHHSRQILRESGEPVDLARAHAEHVNQSASCSQDVRKGSGCTGSGQTD
INTNTMVALESGNESGVQNCYNNGLDSDRSRREAALMKFRMKRKDRCFEKKVRYHSRKKL
AEQRPRVKGQFVSQKLKSATTVDAETDS
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgtctcccgacgcggacgccgccgtcgccagcgccggcgggggaggaggagggggcggg
gaggctgcgggcgcctcgccgtcccccgcgtccgcggcggcggtgcggtgggaccagatc
ctcccgcgccgctccctccgcgtcctcctcgtcgagcacgacgactccacgcgccaggtc
gtcaccgcgctcctccgcaagtgcggctaccgcgtggccgcggtcgccgacgggatgaag
gcgtgggaggtcatgcgggggcgcgcctacgccttcgacctcgtgctcaccgaggtcgcc
atgccctcgctctccggcatccagctgctcgcaaggatcgtcgccgccgacgagtgcaag
aacatccccgtcatcatgatgtcgtcacaagattctattggtacggtgctcaagtgcatg
cagaagggtgcagtggacttccttgtaaaaccagtgcgaaagaatgagctgcgtaactta
tggcaacatgtatggaggcggcatgcaatgaatagccaaataaatggatcagaaaataat
gcagccagcaatcatataagtgccaatgttgctaatgtttcaaaggccggagaaaacagc
gatgaggaaagtgatgcccaaagctttggtagcaagagggagactgaaattcagagtatt
gagaagttaccagatactcgtgcagatgaaggggctggctcgtccagaaaaagtaaacta
caaaatgagtcttatgatggagtaaacacaaagttgcatgtgtcaaaagatagcgatgat
gccccaagtgtaagtgagaagaatgtgcgttccaaaggccttaatggtattacttcagcc
aaggttgctgagcaaataatggataatgccttgaggattgctgatgcaagttcacgtcga
ccaagcaatcttggcaaagacttggctatggcccaaccaacagctgatggacaatgtaaa
tcttcagtcgtggaacgaaatgctcccacagaaagtagccttggtgaaaaatcaaagggt
gctgcaataagtaatgctaaatcttgtccgtcccaattcctggagaccaaccaacaccat
cttagtggttacaaaatccaagagttcagggaaaaagatatcttcaatcactcgaattcc
tctgccttttcaagatatggcaataaaaggatagagccgtcagctgagcaccagtttttc
ccttctcactgcataactcgtcaagaacctgttcatgacaaggacccagtttcccaaccc
agtggggtgttacctccccatgaacataattcaggtgagagtagaaggcaagctcatatt
cctttggacagtagcacagagggagctgctgtactgtgttccagtagtgctagagaagat
gtaggtgcaagcagttcctcccatagacaggacaatatgagccatccttcatatgggttc
atacctcttccaattcctgttggtgctgcgatgccttaccattatggtgcgattctgcag
ccagtatactacccacaggctcctcgcatgcattgtgattcaggtggcatcaacaaggca
gctattcagcatgcctctggtcaattgaattaccatgaaaatcgtagtataccttctcag
gttgatgaacacaaacagtcggaggaaaatcagcagttgcatcattcaagacaaattctc
agagaatcaggagaaccagttgacttggcgagagctcatgcggagcacgtgaaccagagt
gctagctgcagccaggatgtacgtaaaggaagtggatgcaccggtagcggccaaactgac
atcaatacgaatacaatggttgccctggaaagtggtaacgaaagtggtgtccagaactgc
tataataatgggttggatagtgaccggtctcgccgtgaagctgccttgatgaagtttcgc
atgaaaaggaaagatagatgcttcgagaaaaaggttagataccatagcaggaaaaagctt
gcagagcaaagaccgagagttaaggggcagtttgtgagccaaaagctgaaatcagctaca
acagtggatgcggaaactgactcatga
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