Panicum virgatum (switchgrass): 120643644
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Entry
120643644 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120643644
KO
K17925
sorting nexin-13
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pvir04990
]
120643644
Domain-containing proteins not elsewhere classified [BR:
pvir04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
120643644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
120643644
NCBI-ProteinID:
XP_039775997
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All DBs
Position
8K:complement(4663884..4678642)
Genome browser
AA seq
1035 aa
AA seq
DB search
MRKRMESVDDLIEEAKLRTVGWALCVFAVSYFLTHTSKSMWTNVPMSILILAFLRYLSFK
VEFRWREQPARKHTYLSQVSKKQLSANDHRLSTVLPVSRWRRKVGSPSVEAAFESFTDNI
LRDFVLDLWYSDITPDREAPELIRGLILHALGELSGRVKEMNLVDLLTRDMVDLIGEHLD
IFRKNQILIGADVMRTLSSEERDERLKQHLIVSQELHPALLSSEHEYKVLQEIVGGIMAL
VLRPQDAQSPLLRCFSREFMTCLVLQPVMNFASPIYMNELIVYLLNNNDTSNVGGNANMA
NTGTVTVVHDHPSYKGSSQGSQKESRNLTLEPSGLVPGNNSGMRTLVTSEGGKSKVLQDD
HDSAIQPRQPNWAVVLDAATKRRSEVLAPENLENMWAIGRNYQKKMVKANHSSRLKGSGG
LDNSPSAGAVGKELSSNFNERIASVDDKYMVNMMHSTNRNVQSTFVTGSHPLALQNKNEV
KPKEVNQVSYSSKEKTHETSNIAKEQLKRSSSTPDIEKRYLAKSNHPMVSSESGNARKNQ
DDKVSGLASHGEVLLHVPKIRCRVVGAYFEKLGSKSFAVYSIAVTDADNKTWFVKRRYRN
FERLHRQLKEIPNYSLHLPPKSFLSSSVDDYLVHQRCILLDKYLQDLLSIANIAEQHEVM
DFLSASSKNYSAGKSTSVMKTLAVNVDDAMDDIVRQFKGVSDGLKRAVGTSPSSATAEFI
DNRMSLPWNQEETDNHNVHHRNLERVHSLSDGDSNYEDLTSSVNSGCHSDNEVNNKGHTS
NDIKHIKTYASFDSSQVSEQIQKPVRAYSDSSNMSSPNTFEDPTGIPPEWMPTNVSVPLL
NLVENVFQLKRRGWIRRQVLWISKQILQLVMEDAIDEWIIRQINWLRREDFIVQVIRWIQ
DTLWPNGIFFTKLDGYKGNGSSSQFDKQSSGTGSAKKSGASSFEFQLEASRNASEVKKLL
LDGTPSTLISIIGYKQYRRSARDMYYFLQSNVCVKQLSYAMLEQVIVTIFPELRQLIDDI
HEKGRKEQASFTYHL
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgcggaagaggatggagagcgtggacgatctgatcgaggaggccaagctgcgcaccgtg
gggtgggcgctctgcgtcttcgccgtctcctacttcctcacgcatacaagtaaatcgatg
tggacaaatgtgcccatgtcaatccttatacttgcatttctccgatatctctccttcaaa
gtggagttccgttggagggaacagcctgcacggaagcatacatatttgtctcaagtatca
aagaaacagttatctgctaatgaccatcgtctttcaaccgtgctgccggtttcaagatgg
agaaggaaagttggctcaccttccgttgaggctgcttttgaaagtttcactgacaatatt
ttgagggactttgttttagacttgtggtattcagatattactcctgacagagaggcccca
gaactgatacgtggcttaatacttcatgctcttggtgaattatcaggcagggtgaaagag
atgaatctagttgacttgctaacaagggatatggttgatttgattggtgagcatttagat
atttttcggaagaatcaaattctaattggtgctgatgttatgaggacgttgtcttccgag
gaaagagatgagagactgaagcagcacctaatagtttcacaggaacttcatccagcactg
ttatcttcagagcacgagtacaaggttcttcaagaaattgtagggggcattatggctcta
gttttgagaccacaagatgctcagagtccactacttcgctgtttctccagggaattcatg
acctgccttgtcttgcagccagtgatgaactttgcaagtccaatctatatgaatgagtta
attgtctaccttctaaacaacaatgacacgagcaatgtaggaggcaatgcaaacatggct
aatactggaactgtgacggtagtgcatgatcatccatcttacaaaggcagttcgcaaggt
tctcaaaaggaatcaaggaatttgactttagaaccaagtggcttagttccaggaaataat
tctggcatgaggacacttgttacttctgaaggtggaaagtcaaaagtgttgcaggatgac
catgacagtgccatccagcctcggcagccgaactgggcagtggtattggatgcagctact
aaaagaagatcagaggttcttgcccctgagaatcttgagaacatgtgggcaataggaaga
aattaccaaaagaaaatggttaaagcaaaccattcatcaagattgaaaggttctggtggt
ttagataacagtccaagtgctggggcagtgggtaaagagctatcctctaacttcaatgag
agaattgcatctgttgatgataaatacatggtgaacatgatgcatagtacaaataggaat
gttcaatccacatttgtcacaggcagtcatcctcttgctttacaaaataagaatgaagtg
aaaccaaaagaggtgaatcaagttagttacagcagcaaggaaaaaacacatgaaaccagc
aacattgcaaaagagcaactaaagcggtctagtagtactcctgatattgagaaaagatat
ttggccaaaagtaaccaccccatggtttccagtgaaagtggaaatgcaaggaaaaatcag
gatgataaggtttctggtcttgcctctcatggtgaggtactgttgcatgttccaaagata
agatgcagagttgttggtgcatatttcgagaaactaggttcaaaatcttttgcagtttat
tctattgctgtgactgatgcagataacaagacctggtttgtgaaaagaagataccgaaat
tttgaacgtcttcatcgacagctgaaggagatacctaattattcattgcatctacctcca
aagagttttctttcatctagtgttgatgattaccttgtgcaccaacgatgcattctcctg
gacaagtatcttcaagatctcttgtctatagctaatattgcagagcagcatgaagttatg
gattttcttagtgcatcctcaaagaattactctgcaggaaagtccacctctgttatgaaa
actttggctgttaatgttgatgatgcaatggatgacattgttcgacaatttaaaggagtt
tcagatggtttgaaacgggcggttggcacatcaccttctagtgcaactgcagaattcata
gataatagaatgtctctgccttggaaccaagaagagacagataaccacaacgtgcatcat
agaaacttggaaagggttcatagcctttctgatggtgatagtaactacgaagatctcacc
tcatctgtaaatagtggatgccactcagacaatgaggtgaataataaaggacatacttca
aatgatattaagcacatcaaaacatatgccagttttgattcatcacaagtgagcgaacaa
atacaaaaacctgtgagggcatattctgattcttcaaacatgtcatctccgaatacattc
gaggatccaacaggaattcctcctgagtggatgccaacaaatgttagcgtgcctttattg
aacctggtcgagaatgtattccagctaaagcgacggggatggatacggagacaagttctt
tggatatcgaaacaaattttgcagttggtcatggaagatgcaatcgatgaatggattata
agacaaatcaactggctccgaagagaggatttcattgttcaagtaatacgttggattcaa
gataccctttggcctaatggtatattcttcaccaagttggatggttacaaagggaatggc
agctcaagtcaattcgacaagcagtcatctgggactgggagtgccaaaaagagtggtgca
agctcatttgaatttcagcttgaggcatctagaaatgccagtgaagttaagaaacttctt
ttagatggaactccatctaccttaatcagcataattgggtacaagcagtaccgacgtagt
gcaagggacatgtactacttcctccaatctaatgtctgcgttaagcagctctcgtacgca
atgttagaacaggtgatcgtgacaatcttcccagagctccgtcagctaatcgacgacatc
catgagaagggccgcaaggagcaagcctcattcacataccatctctga
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