Panicum virgatum (switchgrass): 120643653
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Entry
120643653 CDS
T07260
Name
(RefSeq) nuclear transcription factor Y subunit A-3-like isoform X1
KO
K08064
nuclear transcription factor Y, alpha
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120643653
Transcription factors [BR:
pvir03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
120643653
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Gene cluster
GFIT
Motif
Pfam:
CBFB_NFYA
Motif
Other DBs
NCBI-GeneID:
120643653
NCBI-ProteinID:
XP_039776019
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Position
1K:complement(53193757..53199588)
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AA seq
336 aa
AA seq
DB search
MSIKERRKWSDAVEGGQSQDQRKGRAGRWQGAEAALLGGRTEGGAWEPCFSPLRLPPPLP
KCQLLLLKGVLWITTYGNSLRKTVIDNMRSTLSFENKQPLFASQAIDYGQPIACISYPYN
DSGSGGVWAAYGSRTSSSTVLYIKQFHPQIAGGGTSARIPLPLELAENEPIYVNPKQYHG
ILRRRQFRAKLEAQNKLVKARKPYLHESRHLHAMKRARGSGGRFLNTKQLQQQPRNASTR
STTNGTASSSGSTHLRLGGGTARDQTMLAPKAMPSQYNSKKAVSSAPGFTVTPMLHRDDT
FFQHPSHHLSFSGHFGQASAQAGMHNGTQQRVPVMR
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagcataaaagaacggcgcaagtggagtgatgcagtcgagggggggcagagtcaagac
cagaggaagggacgcgcggggaggtggcaaggcgcagaagcagctttgctcggcggacgc
accgagggaggcgcgtgggagccatgcttctcccctcttcgtcttcctcctccgcttcca
aagtgccagttacttcttttgaaaggtgttctatggatcacaacttatggtaactccttg
aggaaaacagttattgataacatgagatcaactttaagttttgagaataagcaacctcta
tttgcaagtcaagccattgactatggtcagccaatagcttgcatttcatacccatacaat
gattctggctcaggaggtgtttgggcagcctatgggtcacgcaccagttcttccactgtg
ttgtatataaagcagtttcatccccaaattgctggcggggggacatctgcaagaattccc
ttgcctttggaattagcagagaacgagcccatatatgtgaatccgaaacaatatcacggt
atacttcgcagaagacagttccgtgctaagttagaggctcagaacaagctagtcaaagca
cgaaagccttaccttcatgagtctcggcatcttcatgcaatgaagagggcaagaggttcg
ggtggacgattcctcaatactaaacagctccagcagcagcctcgcaatgcctccaccagg
tccaccacaaatggcacagcaagctcctcaggttcaactcatctacggcttggtggaggc
acagctagagatcaaactatgttggcacccaaagcaatgccctcacaatacaatagcaag
aaggctgtttcttcagctcctggcttcaccgtgactccaatgttgcacagagatgacacc
ttcttccagcacccaagccatcatctcagcttctctggccattttgggcaggcaagcgcg
caagccggcatgcataatgggactcagcaaagggttccagttatgagatga
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