Panicum virgatum (switchgrass): 120643671
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Entry
120643671 CDS
T07260
Name
(RefSeq) syntaxin-61-like
KO
K08500
syntaxin of plants SYP6
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
120643671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120643671
Membrane trafficking [BR:
pvir04131
]
SNARE
SNAP-25[C] (Qc)
STX6
120643671
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Gene cluster
GFIT
Motif
Pfam:
STX6_10_61_N
SNARE
DUF3394
MCU
Motif
Other DBs
NCBI-GeneID:
120643671
NCBI-ProteinID:
XP_039776047
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All DBs
Position
8K:5123995..5126763
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AA seq
235 aa
AA seq
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MTPAQDPFYIVKDEIQDSIDKVQDTFHQWKKTPENTGEYVHLTKELLTSCESIQWQVDEL
DKAISVAERDPAFYGLNEVEIGRRRSWTSTARNQVLSLRRNVESGRKKILLGHSANPSES
IRSKKHISQDNDEFIASESDQQMLLIKRQDEELDALSASVQRIEGVGLTIHDELVGQEKL
LGELNLEMETTSNRLDFVQKRVAMVMKKASLKGQIMMIAFLVILFIILFVLVFLT
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgacccccgcgcaggatccgttctacatcgtcaaagacgagatccaggactcgattgac
aaagtgcaagatactttccaccaatggaaaaagacccctgaaaatactggagagtatgtg
catctgaccaaagaactattaaccagctgcgaaagtatccaatggcaggtggatgaattg
gataaggcaatttcagttgctgagagagatccagcattctatggacttaacgaggtcgaa
attgggagaagaagaagctggacaagcactgcacgtaaccaggtgctctctttaaggcgg
aatgttgaatctggaaggaaaaagattttgcttggacattcggccaacccctctgaatcg
atcagatccaagaagcacatttcacaagacaatgacgaatttattgcttcagaatctgat
cagcagatgctcctgataaagcgacaagatgaggagttggatgcgcttagtgctagtgtc
cagcgaattgaaggcgtaggtctcactatacatgatgagcttgtcgggcaggagaagctt
ttgggtgagctgaacctcgagatggaaactacttcaaatcggctagactttgtgcagaaa
agagtggctatggtcatgaagaaggccagcttgaaggggcagatcatgatgattgcgttc
ctcgtgattcttttcattattcttttcgttttggtgtttttgacttga
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