Panicum virgatum (switchgrass): 120643734
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Entry
120643734 CDS
T07260
Name
(RefSeq) long chain acyl-CoA synthetase 9, chloroplastic-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00061
Fatty acid biosynthesis
pvir00071
Fatty acid degradation
pvir01100
Metabolic pathways
pvir01212
Fatty acid metabolism
pvir04146
Peroxisome
Module
pvir_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
120643734
00071 Fatty acid degradation
120643734
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
120643734
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pvir01004
]
120643734
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120643734
Enzymes [BR:
pvir01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
120643734
Lipid biosynthesis proteins [BR:
pvir01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
120643734
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of breast milk
120643734
Exosomal proteins of breast cancer cells
120643734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Pullulanase_Ins
Motif
Other DBs
NCBI-GeneID:
120643734
NCBI-ProteinID:
XP_039776131
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All DBs
Position
8K:6486793..6493204
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AA seq
697 aa
AA seq
DB search
MNPYFFGFLLPFVASLLLTKRKSEKKRGVPVNVGGEPGCAVRNHGFERPIETHWEGVSTL
AELFEQSCEQFAYMPLYGTRKLIARELEVAPDGRSFEKLHLGNYEWKSYADAFKTVCNFS
SGLLRLGHLKDEHVAIFADTRAEWQIALQACFRQNITVVTIYASLGEEALCHSLNETEVS
TVVCGRKELKKLVDISGQLDTVKHVIYINEEGVSTEVSLAEKCNSWTVKSFEEVESLGLE
RPVEPNLPLPSDTAVVMYTSGSTGMPKGVMMSHRNVLAVVSAVTTIVPDLGKKDVYLAYL
PLAHILELAAEAIITGVGASIGYGSPLTLTDTSNKIKKGTQGDASALKPTLMTAVPAILD
RVRDGVRKNVDAKGGLAKKLFDIAYSRRLAAVNGSWLGAWGLEKLLWDMLVFQKVRAILG
GRIRFILAGGAPLSGDTQRFINICLGAPISQGYGLTETCAGGTFSEYDETSVGRVGPPLP
CSYIKLIDWAEGGYLTTDSPMPRGEIVIGGPNVTKGYFKNEAKTNEVYKDDERGMRWFYS
GDIGRLHPDGCIEIIDRKKDIVKLQHGEYVSLGKVEAALSVCPYVDQIMIHADPFHSYCV
ALVVAAHSELKGWASKQGITYSDFADLCQKQETVKEVLQSLAKAAKQARLEKFEIPAKIK
LIPEPWTPESGLVTAALKLKREIIKKAYEKDLAQLYC
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgaatccgtatttctttggtttccttctcccctttgtcgcatctctactgctcaccaag
aggaaatctgagaagaagaggggagtaccggtcaatgtgggtggagagcccggctgcgct
gtccgtaaccacggatttgaaaggcccatcgaaacgcactgggaaggggtttccacgctt
gctgagctatttgagcagtcatgcgagcagttcgcctacatgcccctgtatggcaccagg
aagctcattgcgagggagttggaagtggctcctgatggaagatcctttgagaagctccat
ttggggaactatgagtggaaaagctatgctgatgcgttcaagactgtgtgcaacttctcg
tctggcctactgagacttgggcacctcaaggatgagcatgttgctatttttgctgatact
cgggctgagtggcagattgcattgcaggcgtgcttcagacaaaacattacagttgtcaca
atctatgcctctttgggggaggaagcgctatgtcactcactaaatgagactgaggtaagt
actgttgtctgcggacggaaagaactgaaaaagctggttgatataagtgggcaacttgac
actgtgaaacatgtcatctacattaatgaggaaggtgtctcaactgaagtatcgttggct
gaaaaatgcaatagctggactgttaagtcatttgaggaggtagagagcttaggactggaa
aggcctgttgaaccaaacttgcctctcccatcagatactgcagtggttatgtatacaagt
ggcagcacaggaatgcctaagggagtcatgatgagccaccgaaatgtcttggctgtagtt
tcagctgttacgaccattgtgcctgatcttggcaagaaggatgtgtacttggcatacctg
ccactagcacatatacttgaattggcagctgaggcaatcataactggtgttggggcttca
ataggatatggatcaccattgaccctgactgatacatccaataaaataaaaaaggggacc
caaggtgatgcttctgcactaaagccaacactaatgactgctgtgcctgctatacttgat
cgtgttcgtgatggtgtacgaaagaatgtagatgcaaaaggtgggttagcaaagaaatta
tttgatatcgcctacagccgtcgtctagctgctgttaatggaagctggttgggtgcatgg
ggactcgagaagctcttgtgggatatgcttgtctttcagaaggttcgtgcaatcttggga
ggaaggattcgctttatccttgcagggggagcacctttgtcaggggacacacagagattt
atcaacatatgtcttggggctccaatatcgcaaggatatggcctgactgaaacttgtgct
ggtgggacattttcagagtatgatgaaacgtctgttggccgtgttggtcctcctctgcct
tgttcatacattaagttgatagactgggccgaaggtggatacttaacaactgattcacca
atgcctcggggtgaaatagttattggaggtccaaatgtaactaaaggctacttcaaaaat
gaagcaaaaacaaatgaagtctacaaggatgatgaaagaggcatgcggtggttctactct
ggtgacattgggcgcctgcacccagatggctgtattgaaatcattgaccgtaagaaggac
attgtcaaacttcaacatggtgaatatgtatctctaggaaaggtggaggcagctttgagt
gtgtgcccatatgttgatcagatcatgatccatgctgaccccttccacagctattgtgtc
gcacttgttgtagctgcacacagcgagctgaaaggctgggcctcaaaacaaggaatcaca
tatagtgattttgcagatttgtgtcagaagcaagagactgtcaaagaagtccttcaatct
ttggcaaaggctgctaagcaagcacgactggagaagtttgagatcccagccaaaatcaag
ctcataccggagccatggacgccagagtcaggccttgttacggccgccctcaagctcaag
agggagatcatcaagaaggcgtacgagaaggaccttgctcagttgtactgctag
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