Panicum virgatum (switchgrass): 120643802
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Entry
120643802 CDS
T07260
Name
(RefSeq) WD repeat-containing protein 20-like isoform X1
KO
K24741
WD repeat-containing protein 20
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pvir04990
]
120643802
Domain-containing proteins not elsewhere classified [BR:
pvir04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
120643802
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_Nup120_160
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_Vps41
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
120643802
NCBI-ProteinID:
XP_039776207
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Position
8K:7878555..7893448
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AA seq
560 aa
AA seq
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MASAGSGAGGAGAGGLKTYFKTPEGRHKLQYEKTHSPAVVHYNHSGKTVSQMTVAYLKEK
PAGQGSTPSTPSAGSGMRSAAARLLGTGNGSRALSFGSNGTSRTVSGSSRIGGGIGASTC
ASGSQGMVNYDGKGTYIIFNTADTLFISDLNSHDKDPIKSIHFSSSNPLCHAFDPESKDG
HDLLVGVFPGDVYSMSLRQQLQDPGKKPVSYQHFINKDKDKDPSQGGAASSRCTCVAWVP
EREGIFIVGHADGNLYVYDKYKDGNTDWAFPTIKDQSQLLISHAKSSKGNPIARWHICQG
AINAISFSPDGAYLATVGRDGYLRIFDFAKEQLIFGGKSYYGALLCCSWSADGKYLLSGG
EDDLVQVWSMDERKIVAWGEGHNSWVSAVAFDPYWSPPNSDETEENVMYRFGSVGQDTQL
LLWDLALDEIAVPLRHPSGGSPTFSSGSPSAHWDNACPPTGVLQPSPRMRDVPKLSPLVA
HRAHVDPLSGLEFTSESILTICREGLIKIWARPSHSEKNQQPDSSDQVVGITTAKDKMLT
SSNIAGTTGSSFKQSSVVFT
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgcggggtcgggcgccggcggcgcgggggcgggcgggctcaagacctacttc
aagacccccgaggggcggcacaagctgcagtacgagaagacgcactcccccgccgtcgtg
cactacaaccacagcggcaagaccgtctcccagatgacggtggcatatttgaaggagaag
ccggctggccaggggtccacgccttcaactccaagtgccggcagtgggatgcgttctgct
gctgcaaggctgcttggtacggggaacgggagccgggcacttagctttgggagcaatggt
accagcaggactgtctcaggaagcagccgcatcggtggtggcattggcgcgtcgacgtgc
gcaagtggatcacaaggcatggtgaattatgatggcaagggaacatacatcatattcaac
actgccgatacgctcttcatcagtgatctcaactcacatgacaaagatccaataaagtcc
attcacttcagcagctcgaacccactttgccatgcatttgatcctgaatccaaggatggg
cacgatctacttgttggggtgttcccaggagatgtctattcaatgtcattgaggcagcag
ttgcaagaccctggaaaaaagcctgtttcatatcaacattttattaataaagacaaagac
aaagacccaagtcaaggtggcgctgccagcagccggtgcacttgtgttgcgtgggttcca
gagcgtgaaggaatttttattgttggccatgctgatgggaatttgtatgtttatgacaaa
tataaggatgggaatactgattgggcatttccaactataaaggatcaaagtcagctgctg
atttcacatgcaaagtcgagtaagggcaatccaattgcaagatggcatatctgtcaaggt
gcaatcaatgccatttccttttcaccagatggtgcttacttggcaactgttgggcgagat
ggttacttgagaatatttgactttgcgaaagaacaactaatatttggtgggaaaagttac
tatggtgcactgttgtgttgctcttggagtgcggacggcaaatatttgttgtcaggtggc
gaagatgatcttgtgcaagtatggagcatggatgaaagaaagatagttgcatggggcgaa
gggcataattcatgggttagcgctgtagcttttgatccatattggtccccaccaaattca
gatgaaaccgaagaaaatgtcatgtatcgctttgggtcagttggacaggacactcaactg
cttctctgggatcttgcactggacgagattgctgtccctctacgtcacccttctggtggc
tccccgacatttagcagtggaagcccttctgcacattgggacaatgcatgccctccaaca
ggtgttcttcaaccttctcctcggatgcgagatgtaccaaagctctcacccctagttgca
caccgggcacatgtagaccccctctctggcctggaattcaccagcgaatcaatcctcacc
atatgccgtgaagggctaatcaaaatctgggccagacccagccatagtgaaaaaaaccag
cagcctgattcttctgatcaggtcgtaggcatcaccactgcgaaggataagatgctaaca
tcgtcgaacatagcaggcactaccggctccagcttcaaacaatcatctgttgttttcaca
tga
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