Panicum virgatum (switchgrass): 120643818
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Entry
120643818 CDS
T07260
Name
(RefSeq) alpha-dioxygenase 1-like isoform X1
KO
K10529
fatty acid alpha-dioxygenase [EC:
1.13.11.92
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00592
alpha-Linolenic acid metabolism
pvir01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00592 alpha-Linolenic acid metabolism
120643818
Enzymes [BR:
pvir01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.92 fatty acid alpha-dioxygenase
120643818
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Motif
Pfam:
An_peroxidase
Motif
Other DBs
NCBI-GeneID:
120643818
NCBI-ProteinID:
XP_039776223
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Position
8K:complement(8327964..8337037)
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AA seq
617 aa
AA seq
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MGSGLFKPCVHPDLRDVFSKMSFGDKIGFLFIHAFDKRNLWHKMPVPIGLLYLNTRRTLL
EKYNLLPVGSSHGALFDPKEFLYRTGDGKYNDPHNAEAGSQNTFFGRNMKPVDQKDELMS
PDPFVVVTKLLSRREYKDTGKQFNILAAAWIQFMVHDWIDHMEDTKQIEITAPKEVANEC
PLKSFKFYATKELPTNSDGIKTGYYNVRTAWWDGSAVYGDNEKKAKKIRTYVDGKLVIGD
DGLLLHDENGVPLSGDVRNNWVGVSILQALFVKEHNAACDVIKEEHPNLSDEELYRYARL
VTSAVIAKVHTIDWTVELLKTKTMRAAMRANWYGLLGKKIKDTFGHIGGPALGGLVGLKK
PNNHGVPYSLTEEFTSVYRMHSLLPSTLKLRDPNGQPDANNSPPYLEDIDIGELVGLKGE
EKLSKIGFEKQTLSMGYQACGALELWNYPSFFRDLIPQNLDGTSRSDRIDLAALEVYRDR
ERSVPRYNEFRRRLFLIPIKSWEDLTSDKDAIEAIRAIYGDDVEKLDLLVGLMAEKKIKG
FAISETAFNIFIIMASRRLESDRFFTSDFNEKTYTRKGMQWVKTTEGLRDVINRHYPEIT
AKWMKSSSAFSVWDADY
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgggttcaggtctcttcaagccttgtgttcatccggacctccgtgatgttttctctaag
atgtctttcggtgacaagattggctttctattcattcatgcatttgacaagagaaaccta
tggcataagatgcctgttccgatcggtttactctacctgaacactcgccggaccctactt
gaaaaatacaaccttctaccagttgggagttctcatggtgccctgtttgaccccaaggag
ttcttgtaccgcactggagatggcaagtacaacgacccccataatgctgaggctggtagc
caaaacaccttttttgggagaaacatgaagccagttgatcaaaaggatgagttgatgagc
ccagatccatttgttgtggtgacaaagctgttatctaggagagaatacaaggacacaggg
aaacaattcaatatactagcagctgcatggatacagttcatggttcatgactggatagat
catatggaggataccaaacagattgaaatcaccgctccaaaagaagtggccaatgagtgc
ccactcaaatcgttcaagttctacgccacaaaagaactgcctacgaattctgatggaata
aagactggttactacaatgtccgcacagcttggtgggatgggagtgcagtatatggtgat
aatgagaaaaaggcaaaaaagatcaggacttatgttgatggaaaactagtgatcggagat
gacggtcttcttttgcatgatgagaatggtgtgccattatccggcgatgttcgcaacaat
tgggttggggtttcgatcttacaagctctttttgttaaggaacacaatgcagcttgtgat
gtaataaaggaagaacatcccaacctatcagatgaagaattatatcgatatgccagattg
gtcacttctgctgtcattgcaaaggttcacactattgattggaccgtcgagcttctcaag
actaaaaccatgagagctgcaatgcgcgcaaattggtatggattattgggtaagaagata
aaagatacatttggtcacataggaggaccggcattaggtgggcttgtgggattgaagaag
ccgaacaaccatggcgtaccttattctttgactgaagagtttaccagtgtttacagaatg
cactccctcttaccaagcactctcaagcttcgggatccgaatgggcaacccgatgcaaat
aattccccaccatacctggaagacattgatattggagaattggttggtctcaagggggaa
gaaaagctatcaaaaatagggtttgaaaaacaaacattatcaatgggatatcaagcttgt
ggtgcacttgaactatggaactacccaagtttcttccgggacctcataccacaaaatttg
gatggtaccagtcgatctgacagaatcgaccttgctgccctagaagtataccgagacagg
gagagaagtgtaccgaggtacaatgagttcaggaggagactatttctgattccaataaaa
agctgggaggatctgacaagtgacaaggatgcaattgaagccataagagcaatatatgga
gatgatgtagagaaattggaccttcttgttggtcttatggcagagaaaaaaatcaaggga
tttgccataagcgaaacagcattcaacattttcattataatggcatcaaggaggctcgaa
tcagatcgattttttacaagcgatttcaatgagaaaacatacaccaggaaggggatgcaa
tgggtcaaaacaactgaaggcctacgagatgtgatcaaccggcactaccctgaaatcact
gccaagtggatgaagtcctctagtgctttctctgtgtgggatgcagactactag
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