Panicum virgatum (switchgrass): 120643943
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Entry
120643943 CDS
T07260
Name
(RefSeq) la-related protein 6B-like isoform X1
KO
K15191
La-related protein 7
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvir03021
]
120643943
Transcription machinery [BR:
pvir03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
7SK RNP complex
120643943
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
La
RRM_1
U_exon
Motif
Other DBs
NCBI-GeneID:
120643943
NCBI-ProteinID:
XP_039776390
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All DBs
Position
8K:11995077..12005016
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AA seq
472 aa
AA seq
DB search
MEPAGSEAEERAPGGLPRSGSASRLNARAPEFVPRAAAAGTPPPPPPPQAVVRLFPPPPP
AAFFVAPPPPPPFEYYAAVAAGGAPAPGARFGPPAPAAAEQEAEAELPARDGSFDDPVHK
IRKQVEYYFSDINLATTEHLMRFISKDPEGYVPISVVAGFKKIKALVQSNSMLASALRTS
SKLVVSDDGTRVKREQPFTESDLEELQARIVVAENLPDDHCYQNLMRLFSAVGSVRTIRT
CYPQTPIGTGPATNRSAKLDMLFANKLHAFVEYDTMEDAARALVELNDERNWRSGLRVRL
LSACMTKGGKGRKSGHEADGYGEEENVSTSDQRNDKHLEEAPQLSDAAVEHMTEDGIGDM
GRGRGRGRGRGGRGRGRGYHQYNNQQYHNQQQQHRSSSQHGNSRSVAHPVGTPPSAHPDK
NEQQTQPQPQQSSTANKQPPGPRMPDGTRGFTIGRGKPQPSGPSVSASEPEP
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggagcccgcgggttcggaggcagaggagcgggcgccggggggcctcccgcggagcggc
tccgccagccgcctcaacgcgcgggcgccggagttcgtgccgcgcgccgcggcggcgggg
accccgcccccgccgcccccgccgcaggcggtcgtgcgcctgttcccgccgcctcctccc
gcggcgttcttcgtcgcgccgcccccgccgccgccgttcgagtactacgcggcggttgcc
gccggcggcgcccccgcccccggcgccaggttcggtccccccgcccccgccgcggcggag
caggaggccgaggccgagctgccggcgagggacgggagcttcgacgacccggtgcacaag
atcaggaagcaggtggaatattatttcagtgatataaacctggccactactgaacatttg
atgaggtttatttcaaaggaccctgaaggatatgtgccaatatcagttgttgctggcttt
aagaaaatcaaggctttggttcaaagtaattccatgcttgcttctgctcttcggacttca
tcaaaacttgttgtcagcgatgatggaacaagagtaaaacgcgagcagccatttacagaa
tcagatttagaagaacttcaggcccgaattgtggttgcagaaaatcttccagatgatcat
tgttaccagaatctaatgaggctcttttcagcagttggcagtgtgaggacaattaggact
tgctaccctcagactcccattggaactggtccagctactaacagatctgccaagctagat
atgctttttgccaacaagctgcatgcttttgttgagtatgatactatggaagatgctgca
agagcgcttgtggaacttaatgatgagaggaactggagaagtgggctcagagtacggttg
ttgagcgcttgcatgacgaagggaggtaaagggagaaagagtggtcatgaagctgatggt
tatggtgaagaggagaatgtctccacctctgatcaacgaaatgacaaacatttagaagaa
gcacctcaactgtcagatgcagctgtagaacacatgactgaggatggcattggagatatg
ggaagaggacgtggcagaggccgtggccgtggtggcagaggccgagggcgtggttaccac
caatataacaatcaacagtaccacaatcaacagcaacagcaccgaagcagcagtcaacac
ggtaacagccgtagcgtggcccatccggttggaaccccaccatctgcccacccagacaag
aatgagcagcagacacaaccgcagccacaacaatcctcaacagctaacaaacagcctcca
ggccctcgcatgcctgatggcacacgcggattcaccattggcagagggaagccgcaacca
tcagggcccagcgtgtccgcttctgaacctgaaccttga
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