Panicum virgatum (switchgrass): 120643974
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Entry
120643974 CDS
T07260
Name
(RefSeq) chlorophyll a-b binding protein CP26, chloroplastic-like
KO
K08916
light-harvesting complex II chlorophyll a/b binding protein 5
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00196
Photosynthesis - antenna proteins
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
120643974
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
pvir00194
]
120643974
Photosynthesis proteins [BR:
pvir00194
]
Antenna proteins
Light-harvesting chlorophyll-protein complex (LHC) - Plant, Green alga [OT]
LHCII
120643974
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Chloroa_b-bind
Motif
Other DBs
NCBI-GeneID:
120643974
NCBI-ProteinID:
XP_039776423
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Position
8K:complement(12916096..12918161)
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AA seq
282 aa
AA seq
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MAALAPSKILGTQLNFAGSSRYATTAPTAGAQKIVSLFSKKPAQKPKPAAVSSSPDISDE
LAKWYGPDRRIFLPDGLLDRSEVPEYLTGEVPGDYGYDPFGLGKKPEDFAKYQAYELIHA
RWAMLGAAGAVIPEACNKFGANCGPEAVWFKTGALLLDGNTLSYFGNSIPINLVVAVIAE
VVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLASDPDQAAILKVKEIKNGRLAMFSMLA
FFIQAYVTGEGPVENLAKHLSDPFGNNLLTVISGAAERTPSL
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcttgctccatccaagatcctcggcacccagctcaacttcgctggctcctcc
cggtacgccaccactgcaccgaccgctggggcgcagaagattgtctccctcttcagcaag
aagcctgcccagaagcccaagcccgccgcggtatcatcctcgccggacatcagcgatgag
ctcgccaagtggtacggtcctgacaggaggatcttcctgccggatggcctcttggaccgc
tcagaggtgccggagtacctcaccggagaggtcccaggagactatggctatgatcctttt
ggcctgggcaagaagccagaggacttcgccaagtaccaggcctacgagctgatccatgcc
aggtgggccatgctcggcgccgccggtgccgtcatcccggaggcgtgcaacaagttcggc
gccaactgtggccctgaggccgtctggttcaagaccggcgccctgctgctggacggcaac
accctcagctacttcggcaacagcatccccatcaacctggtggtggccgtgatcgccgag
gtggtcctcgttggcggcgccgagtactaccggatcatcaacggcctggacctggaggac
aagctgcaccccggcggcccgttcgaccccttgggcctggccagcgaccccgaccaggct
gccatcctcaaggtgaaggagatcaagaacggccggctggccatgttctccatgctcgcc
ttcttcatccaggcgtacgtcaccggcgaaggccccgtcgagaacctcgccaagcacctc
agcgaccccttcggcaacaacctcctcaccgtcatctccggcgccgccgagaggacgccc
agcctgtga
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