Panicum virgatum (switchgrass): 120643983
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Entry
120643983 CDS
T07260
Name
(RefSeq) non-lysosomal glucosylceramidase-like isoform X1
KO
K17108
non-lysosomal glucosylceramidase [EC:
3.2.1.45
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00511
Other glycan degradation
pvir00600
Sphingolipid metabolism
pvir01100
Metabolic pathways
pvir04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
120643983
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
120643983
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
120643983
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.45 glucosylceramidase
120643983
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Gene cluster
GFIT
Motif
Pfam:
DUF608
Glyco_hydr_116N
EF-hand_1
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
120643983
NCBI-ProteinID:
XP_039776428
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Position
8K:complement(13335328..13346301)
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AA seq
952 aa
AA seq
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MVENGPDEQPKGVSRNSPPAHMNGDEEKVYPGQLPVLTWKHKLTHVRHILPSFRLTWREM
RQLAGIGLRLGRHIVEETSKGRTAVIDPMKKRIANSGQGVPLGGIGAGSIGRSYTGNFQR
WQLFPGTCEDKPVLANQFSAFISRQDGRKYSTVLHPGKPDLPKGSDISGIGSWDWNMSGQ
HSTYHALYPRAWTVYDGEPDPELNIVCRQISPVIPHNYQQSSYPAAVFTFTVTNSGHTVA
DVTLLFTWANSVGGKSDITGYHSNSSMIEKDGVHGILLHHSRTADGQPPITFAIAAQEKE
DIHISECPYFVISGSSDGFTAKDMWNSVKEHGSFDHLDPIKTSICSKPGSSIGAAIAASL
KIAPKATRDVSFSLAWACPEVKFSSGKTYHRRYTKFYGTDVDAAASLARDAILEHTSWER
LIEEWQDPILQDKRFPAWYPVTLFNELYYLNAGGTIWTDGLPPIQSLTGIGGKQFSLDML
NDDDVNEMVQQNNTASDILNRMASVLERMHASIASNSAIGTTLLHGEENIGQFLYLEGIE
YYMWNTYDVHFYASFSLVMLFPKLQLSVQRDFAAAVMMHDPEKLRILHDGKWAARKVLGA
VPHDLGLYDPWFKVNAYTLYNTDRWKDLNPKFVLQVYRDVVATGDKSFARAVWPSVYMAM
AYMEQFDKDKDGMIENEDFPDQTYDGWSMAGISAYCGGLWVAALQAASALAREVGDKASE
KLFWDKYEKAKSVYSKLWNGSYFNYDDGENKMSTSIQADQLAGQWYGKACGLFPIVDKDK
AQSALERIYSFNVMKFKDGKRGAMNGMWPDGTLDMSAMQSREIWPGVTYALAATMIQEGM
VEQGFKTAEGIYHAAWSPEGLGYSFQTPEAWNNDDEYRSLCYMRPLAIWAMQWALSDPKL
HNTPQTDIPQDSSPKTQISYARIAKLLQLPEDESSKSFVRVVYEIIWNRFRS
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atggtagagaatggtccggatgagcaaccaaaaggggtgtctcggaatagtccacctgct
catatgaatggtgatgaggaaaaggtttatcctggacagcttccagtgttgacctggaaa
cacaagctaactcatgttagacatattttgccatcattcagacttacatggagagagatg
aggcagctggctggtattggtcttcgtcttggtcgacatattgttgaagaaacttcaaaa
ggacgaactgctgtcattgatcctatgaaaaagcgaattgcaaactccggtcaaggtgtt
ccacttggtggcattggtgcaggaagtattggaagaagttacacaggtaacttccaacgt
tggcaattgtttcctggaacttgtgaggataaacctgtactggcaaatcaattttctgcc
ttcatttcccgccaagatggtagaaaatattccacagtgttgcatcctgggaaaccagat
ttaccaaaaggaagtgacatttcaggaattggatcctgggactggaatatgagtggacaa
cattctacttatcatgctctttaccctagggcctggacagtatatgatggagaacctgat
cctgagctcaacatagtatgccgtcagatatctcctgtcattccacacaattatcaacag
agcagctatccagctgcagtattcactttcacagtaaccaattcaggacatacagttgct
gatgtgactttgctttttacatgggctaactctgttggtggaaaatctgatatcacggga
tatcattccaactccagtatgatagaaaaagatggcgttcatggcatactgttacatcac
agcagaacagcagatggtcaaccacctataacttttgcgatagctgcacaggagaaagag
gatattcatatctctgaatgtccttactttgtaatatctgggagctcagatggattcaca
gcaaaagatatgtggaattctgtgaaagagcatggatcttttgatcatcttgatcctata
aaaacttcaatatgctccaagccaggatcgtcaattggggcagctattgccgcttctctt
aagattgctcccaaggcaacccgggatgtttcattttcacttgcatgggcttgtcctgaa
gtgaagttctccagtgggaaaacatatcacaggcgttacaccaagttttatggaacagat
gttgatgcagcagcaagccttgctcgtgatgccattcttgaacatacttcctgggagagg
ctgattgaggagtggcaggatcctattttgcaagacaagaggttccctgcatggtatcca
gttacacttttcaatgaactatattatcttaatgctggaggaactatatggacagatgga
ttgccaccaattcaaagcttgacaggaattggtggtaaacaattttctcttgacatgcta
aacgatgatgatgttaatgagatggtccaacagaataatactgcttctgacattcttaat
agaatggcatcagtacttgagaggatgcatgcatctattgcgtcgaattctgctatagga
acaactttgcttcatggtgaagagaacattggccaatttctgtaccttgagggcattgag
tattacatgtggaacacatatgatgtccacttttatgcatcattttcacttgtcatgttg
tttccaaaacttcaacttagtgttcagagagactttgctgctgctgtcatgatgcatgat
cctgaaaagctcaggatcttgcatgatgggaaatgggctgcaagaaaagttcttggtgct
gtacctcatgatcttgggctatatgacccgtggttcaaagtgaatgcatatacactctac
aatactgatcgctggaaagatttgaatccaaagtttgtgctgcaagtttatagagatgtt
gtggccacaggggataaatcctttgcccgagctgtttggccatcagtttatatggcaatg
gcatatatggagcaatttgacaaggataaagatgggatgattgaaaatgaggatttccca
gatcaaacatatgatgggtggtcgatggctggtataagtgcgtactgcggtggtctttgg
gtggctgctcttcaggctgcatcagccttagcaagggaagttggtgacaaagcttctgaa
aagcttttttgggacaaatatgagaaggccaagtctgtctatagcaagttatggaatggt
tcttacttcaattatgatgatggtgaaaacaaaatgagcacatctatccaagcagatcaa
ttggctgggcagtggtatggcaaagcctgtggtctcttcccaattgtcgacaaggataag
gcacaaagtgcattagaaaggatatattctttcaatgtgatgaagtttaaggatggcaaa
aggggagcgatgaatgggatgtggccagatggcacactggacatgtctgcaatgcagtct
agggagatatggccaggtgtgacatatgcactagctgcgactatgattcaagaaggcatg
gtagagcaggggtttaaaacagctgaagggatctatcatgctgcctggtctccagaagga
cttggatactcgttccaaactcctgaagcttggaacaatgacgatgagtaccggtccctg
tgctacatgcgcccgcttgccatatgggcgatgcagtgggcactgtcagacccaaagctc
cacaatactcctcagacagatataccccaggattcttcccccaagacccagatctcttat
gcacgaatcgcaaagctcctgcagttgcctgaagatgaatcgtcgaagagcttcgtccga
gtagtgtatgagatcatctggaacaggtttaggtcctga
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