Panicum virgatum (switchgrass): 120643983
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Entry
120643983 CDS
T07260
Name
(RefSeq) non-lysosomal glucosylceramidase-like isoform X1
KO
K17108
non-lysosomal glucosylceramidase [EC:
3.2.1.45
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00511
Other glycan degradation
pvir00600
Sphingolipid metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
120643983
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
120643983
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.45 glucosylceramidase
120643983
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Gene cluster
GFIT
Motif
Pfam:
DUF608
Glyco_hydr_116N
EF-hand_1
EF-hand_5
DDE_Tnp_IS1595
Motif
Other DBs
NCBI-GeneID:
120643983
NCBI-ProteinID:
XP_039776428
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Position
8K:complement(13335328..13346301)
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AA seq
952 aa
AA seq
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MVENGPDEQPKGVSRNSPPAHMNGDEEKVYPGQLPVLTWKHKLTHVRHILPSFRLTWREM
RQLAGIGLRLGRHIVEETSKGRTAVIDPMKKRIANSGQGVPLGGIGAGSIGRSYTGNFQR
WQLFPGTCEDKPVLANQFSAFISRQDGRKYSTVLHPGKPDLPKGSDISGIGSWDWNMSGQ
HSTYHALYPRAWTVYDGEPDPELNIVCRQISPVIPHNYQQSSYPAAVFTFTVTNSGHTVA
DVTLLFTWANSVGGKSDITGYHSNSSMIEKDGVHGILLHHSRTADGQPPITFAIAAQEKE
DIHISECPYFVISGSSDGFTAKDMWNSVKEHGSFDHLDPIKTSICSKPGSSIGAAIAASL
KIAPKATRDVSFSLAWACPEVKFSSGKTYHRRYTKFYGTDVDAAASLARDAILEHTSWER
LIEEWQDPILQDKRFPAWYPVTLFNELYYLNAGGTIWTDGLPPIQSLTGIGGKQFSLDML
NDDDVNEMVQQNNTASDILNRMASVLERMHASIASNSAIGTTLLHGEENIGQFLYLEGIE
YYMWNTYDVHFYASFSLVMLFPKLQLSVQRDFAAAVMMHDPEKLRILHDGKWAARKVLGA
VPHDLGLYDPWFKVNAYTLYNTDRWKDLNPKFVLQVYRDVVATGDKSFARAVWPSVYMAM
AYMEQFDKDKDGMIENEDFPDQTYDGWSMAGISAYCGGLWVAALQAASALAREVGDKASE
KLFWDKYEKAKSVYSKLWNGSYFNYDDGENKMSTSIQADQLAGQWYGKACGLFPIVDKDK
AQSALERIYSFNVMKFKDGKRGAMNGMWPDGTLDMSAMQSREIWPGVTYALAATMIQEGM
VEQGFKTAEGIYHAAWSPEGLGYSFQTPEAWNNDDEYRSLCYMRPLAIWAMQWALSDPKL
HNTPQTDIPQDSSPKTQISYARIAKLLQLPEDESSKSFVRVVYEIIWNRFRS
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atggtagagaatggtccggatgagcaaccaaaaggggtgtctcggaatagtccacctgct
catatgaatggtgatgaggaaaaggtttatcctggacagcttccagtgttgacctggaaa
cacaagctaactcatgttagacatattttgccatcattcagacttacatggagagagatg
aggcagctggctggtattggtcttcgtcttggtcgacatattgttgaagaaacttcaaaa
ggacgaactgctgtcattgatcctatgaaaaagcgaattgcaaactccggtcaaggtgtt
ccacttggtggcattggtgcaggaagtattggaagaagttacacaggtaacttccaacgt
tggcaattgtttcctggaacttgtgaggataaacctgtactggcaaatcaattttctgcc
ttcatttcccgccaagatggtagaaaatattccacagtgttgcatcctgggaaaccagat
ttaccaaaaggaagtgacatttcaggaattggatcctgggactggaatatgagtggacaa
cattctacttatcatgctctttaccctagggcctggacagtatatgatggagaacctgat
cctgagctcaacatagtatgccgtcagatatctcctgtcattccacacaattatcaacag
agcagctatccagctgcagtattcactttcacagtaaccaattcaggacatacagttgct
gatgtgactttgctttttacatgggctaactctgttggtggaaaatctgatatcacggga
tatcattccaactccagtatgatagaaaaagatggcgttcatggcatactgttacatcac
agcagaacagcagatggtcaaccacctataacttttgcgatagctgcacaggagaaagag
gatattcatatctctgaatgtccttactttgtaatatctgggagctcagatggattcaca
gcaaaagatatgtggaattctgtgaaagagcatggatcttttgatcatcttgatcctata
aaaacttcaatatgctccaagccaggatcgtcaattggggcagctattgccgcttctctt
aagattgctcccaaggcaacccgggatgtttcattttcacttgcatgggcttgtcctgaa
gtgaagttctccagtgggaaaacatatcacaggcgttacaccaagttttatggaacagat
gttgatgcagcagcaagccttgctcgtgatgccattcttgaacatacttcctgggagagg
ctgattgaggagtggcaggatcctattttgcaagacaagaggttccctgcatggtatcca
gttacacttttcaatgaactatattatcttaatgctggaggaactatatggacagatgga
ttgccaccaattcaaagcttgacaggaattggtggtaaacaattttctcttgacatgcta
aacgatgatgatgttaatgagatggtccaacagaataatactgcttctgacattcttaat
agaatggcatcagtacttgagaggatgcatgcatctattgcgtcgaattctgctatagga
acaactttgcttcatggtgaagagaacattggccaatttctgtaccttgagggcattgag
tattacatgtggaacacatatgatgtccacttttatgcatcattttcacttgtcatgttg
tttccaaaacttcaacttagtgttcagagagactttgctgctgctgtcatgatgcatgat
cctgaaaagctcaggatcttgcatgatgggaaatgggctgcaagaaaagttcttggtgct
gtacctcatgatcttgggctatatgacccgtggttcaaagtgaatgcatatacactctac
aatactgatcgctggaaagatttgaatccaaagtttgtgctgcaagtttatagagatgtt
gtggccacaggggataaatcctttgcccgagctgtttggccatcagtttatatggcaatg
gcatatatggagcaatttgacaaggataaagatgggatgattgaaaatgaggatttccca
gatcaaacatatgatgggtggtcgatggctggtataagtgcgtactgcggtggtctttgg
gtggctgctcttcaggctgcatcagccttagcaagggaagttggtgacaaagcttctgaa
aagcttttttgggacaaatatgagaaggccaagtctgtctatagcaagttatggaatggt
tcttacttcaattatgatgatggtgaaaacaaaatgagcacatctatccaagcagatcaa
ttggctgggcagtggtatggcaaagcctgtggtctcttcccaattgtcgacaaggataag
gcacaaagtgcattagaaaggatatattctttcaatgtgatgaagtttaaggatggcaaa
aggggagcgatgaatgggatgtggccagatggcacactggacatgtctgcaatgcagtct
agggagatatggccaggtgtgacatatgcactagctgcgactatgattcaagaaggcatg
gtagagcaggggtttaaaacagctgaagggatctatcatgctgcctggtctccagaagga
cttggatactcgttccaaactcctgaagcttggaacaatgacgatgagtaccggtccctg
tgctacatgcgcccgcttgccatatgggcgatgcagtgggcactgtcagacccaaagctc
cacaatactcctcagacagatataccccaggattcttcccccaagacccagatctcttat
gcacgaatcgcaaagctcctgcagttgcctgaagatgaatcgtcgaagagcttcgtccga
gtagtgtatgagatcatctggaacaggtttaggtcctga
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