Panicum virgatum (switchgrass): 120644041
Help
Entry
120644041 CDS
T07260
Name
(RefSeq) disease resistance protein RPM1-like isoform X1
KO
K13457
disease resistance protein RPM1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120644041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NB-ARC
LRR_14
WH_DRP
Rx_N
LRR_8
AAA_16
LRR_4
AAA_22
AAA_18
Thymidylate_kin
DUF6664
NPHP3_N
AAA_33
RuvB_N
LRR_13
SesA
AAA_14
ResIII
Gp_dh_C
Motif
Other DBs
NCBI-GeneID:
120644041
NCBI-ProteinID:
XP_039776512
LinkDB
All DBs
Position
8K:complement(15742338..15760729)
Genome browser
AA seq
904 aa
AA seq
DB search
MAEALLHTVSKIGSILTEEATKAVIAKLSEKVKNLKELPEKVEEIGNEFKAMSNVIKQIS
TPSLTNELVKDWIGEVRELAHRVEDIMDKYSYYALKLEEENTLKKFFSKAYYVTVFSEIA
EEIIQIERKIENVVKRRDRWLQLPQLISNPLADIERKKPQGCFQEVPQDDLVGIEDNRRQ
LIEWLYSDKQGSTVITVSGMGGLGKTTLVANVYEREKINFTAHAWIVVTKTYDVVELLRK
MVRKIEYQEQSELMDMDAHELKAKIKEKLSAGKCLVVLDDVWNREAYTQIADVFQNLQSS
SIIITTRQEHVSTLAQPRHQLKLKPLERNDAFNLFCKKAFYNRMECKCPQDLEKLAKNIV
DRCQGLPLAIVTIGGMLSSLPTTDYVWNETYKQLRGELANNDHVRAILNLSYHDTPGDLR
NCFLYCGLFPEDHLLSRESLVWLWAAEGFAVPKEQSTAEEVAEGYLRELIQRNMLEVVEN
DELGRVKTCKMHDLVRDLAISIFKDEKFGSANDFSSISNMDKHVRRLSSCGWKDKAAVKV
KFSRLRTLVALGITASSPQLLSPIFSESNYLTVLELQDSEITEVPPSIGNLFNLRYIGLR
RTTVKSLPESVGKLSNLLTLDIKQTKIVKLPRGIVRLKKLRHLLADRYEDEEQSEFRYFI
GMQAPKQLSNLEELQTLETVEANKDLAEQLMQLKQLRSVWIDNIRAADCANLFATLSTMP
LLSSLLLSARDENEELCFQALKPESEKLYRLIIRGCWADNTLDCPIFLDHGRNLKFLAIS
WCRLEEDPLQLLSPYVPNLTYLSLNRVSSAGTLVLAEGSFPKLKTLVLKRMPDVNQLKIR
DGALTQIEGLYVVTLPKLDKVPEGIESLHSLRKLCLLNLHQDFRAQWTTDGMQQKMQYVA
ELHI
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggccttactccatactgtttcaaagattggttccatcttaacggaggaagcc
acgaaagccgtcattgcaaagttatctgagaaagttaagaatctgaaggaattaccagag
aaagttgaggaaatagggaatgaatttaaggcaatgagtaatgtcataaaacagattagt
acaccaagtcttacaaacgagcttgttaaggattggattggcgaggtgcgggagctggcc
caccgtgttgaggatataatggacaaatattcgtattatgctcttaagttggaggaagaa
aatacattgaagaagttcttctcaaaagcttattatgtcacagttttcagtgaaatcgct
gaggagattatacagatagagagaaagatagaaaatgttgtgaagcggcgtgatcggtgg
ctgcagctgccacagcttatttctaacccactagctgatattgaaagaaaaaagccacaa
ggctgtttccaggaagttccacaagatgatcttgtggggattgaagacaacaggagacag
ttgattgaatggctatactctgataagcaaggtagcacagtgatcacagtatctggtatg
ggtggattgggaaaaaccactctggtcgcaaatgtgtatgagcgtgagaagataaacttt
accgcccatgcttggattgtcgtgaccaagacctatgatgtagttgaattactgaggaaa
atggttaggaagattgaataccaagaacagtcagagctaatggatatggatgcccatgag
ttgaaagcaaaaataaaagaaaaactatcagctggaaaatgtttggttgtattagatgat
gtctggaatcgagaagcatacactcagatagcggacgtattccagaatcttcaatcaagt
agcattattatcacaacaagacaggaacatgtgtctactcttgctcaaccaagacatcaa
ctcaaactcaagcccttggaacgcaatgatgcatttaacctcttctgcaaaaaggctttc
tataaccgcatggaatgcaagtgccctcaggaccttgaaaagctggctaagaatatagtg
gataggtgtcaaggcctcccacttgcaatagtaaccataggtggcatgttgtcttcactg
ccaacaacagattatgtttggaatgagacttacaaacaacttcgtggtgagctggcgaat
aatgatcatgttcgtgcaattctaaatctgagctatcatgacacacctggagatcttagg
aattgcttcttgtattgtggtctgtttccagaggatcacctattgtcacgtgaaagcctt
gtgtggctgtgggcagcagaaggttttgcagtgccaaaagaacaaagcacagcagaggag
gtggctgaaggatatctcagagaattgattcaaagaaatatgctggaagttgtggagaac
gatgagctaggcagggttaaaacctgcaagatgcatgacctcgtgcgtgacctggcaatt
tcaatattcaaagatgagaagttcggttctgcaaatgacttttcaagcatttctaacatg
gacaaacatgttcgtcgcctgtcatcatgtggatggaaagacaaagctgcagtaaaagtg
aaattctcgcgccttcgaacccttgtggctcttggaataactgcttcctctcctcagttg
ttatccccaattttttctgaatcgaactatcttactgttcttgagctgcaagattctgaa
ataactgaagtgccaccgtccataggaaatttgtttaatctgcggtacattggtctgcgg
cgcaccacggtcaagtcactcccagagtctgttgggaagctctcaaacctcctcaccctg
gacatcaagcaaacaaaaatagtgaagctacctcgaggcattgttagactcaagaagctg
cggcaccttctggctgaccgatatgaagatgaggagcagtcagagtttcgctatttcatt
ggaatgcaagcaccaaaacagctatccaatttggaagaacttcagactcttgagaccgtg
gaagctaacaaggacttggctgagcagctgatgcaacttaagcaactacggagcgtgtgg
attgacaacataagagctgcggactgtgcaaatctttttgctacactatccacgatgccg
cttctttctagcttgcttctctctgcgagggatgagaacgaggaactttgcttccaagct
ctcaagccagaatctgaaaaactctacagattgataatcagagggtgttgggcagacaat
acactagactgcccgatatttcttgaccatggcagaaatctgaagtttctagctataagc
tggtgtcgacttgaggaagacccgctgcagttgctttctccatacgtgccaaacctaacc
tatcttagccttaacagggtcagcagtgcaggcacattggttcttgctgaagggtccttc
ccaaagttgaagacacttgtcttgaagcgcatgcctgatgttaaccaactgaagatcaga
gatggtgccctcacacagattgaaggtttatatgttgtgacacttccaaaactcgacaag
gtccctgaaggtatcgaatcccttcactctctgaggaagctgtgcctcttgaatttgcac
caggacttcagagctcagtggactacggacggaatgcagcagaaaatgcaatatgttgca
gagctccacatctag
DBGET
integrated database retrieval system
