Panicum virgatum (switchgrass): 120644052
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Entry
120644052 CDS
T07260
Name
(RefSeq) disease resistance protein RPM1-like
KO
K13457
disease resistance protein RPM1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120644052
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Gene cluster
GFIT
Motif
Pfam:
NB-ARC
LRR_14
WH_DRP
Rx_N
AAA_22
LRR_8
LRR_4
AAA_16
Nuf2_DHR10-like
AAA_25
NPHP3_N
AAA_18
NPV_P10
TsaE
AAA_14
Motif
Other DBs
NCBI-GeneID:
120644052
NCBI-ProteinID:
XP_039776527
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All DBs
Position
8K:16056253..16062170
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AA seq
907 aa
AA seq
DB search
MAEAVLLALTKIGSVLADETAKTMLAKLSEKVNNLRDLEDKIEQIRKQLTAMNNVIRKIG
TVYLTDEVVRGWIGEVRKLAYRVEDVMDKYSYHTLQLEEEWFLKKFFIKGSHYVLVFSQI
ADEVVKIEKEIKNVIELKEQWLQPSQLVPDQFIEMERQRSQDSFPLLVKDEDLVGIEDNR
TTLTKWLYSDELDSTVITISGMGGLGKTTLVTNVYEREKINFPAPAWMVVSQTYTMDALL
RKLLMKVGGEQQNIDKLDVHDLKEKIKQKLKNRKCLIVLDDVWDQEVYIQMSDAFQNLQA
SRIIITTRKNHVAALAHPTRHLDLQPLSNIHAFDLFCRRTFYNKKDHTCPNDLVEVATSI
VDRCQGLPLAIVSIASLLSSRPRTYYIWNQMYSQLRSELSKNDHVRAILNLSYHDLSGDL
RNCFLYCSLFPEDYPISRESLVRLWVAEGFVVSKENNTSEEVAEGNLMELIHRNMLVTME
TDEQGRVSTCTMHDIVRDLALAVAKDERFGTANNYGAMILMDNDKDVRRLSSYGWKDIAS
LKVKLPRLRTLVSLGTISSSPDMLLSILCESSYLTVLELQDSEITEVPASIGTLFNLRYI
GLRRTKVRSLPDSVEKLLNLQTLDIKQTKIERLPRGISKIKKLRHLLADRYADEKQSQFR
YFIGMQAPKDLSNLEELQTLETVEASKDLAQQLKKLMQLRTVWIDNICALDCANIFAALS
NMPLLSSLLLSAKDENEALCFDALKPMSTELHRLIIRGQWAKGTLQCPIFQGHGRHLRYL
ALSWCELGEDPLEMLAPHLPNLTNLRLNNIRSAKTLVLPEGSFPHLKMLVLKHMPNVNQL
VIGKGALPCIEGLYIVSLVELDKVPQGIELLRSLKKLWLVNLHRGFLPQWNKSEMHHKMQ
HVIEIRV
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcggtactccttgctctcacaaagattggtagcgttttagcagatgaaact
gccaagaccatgctggccaaactatctgaaaaggttaataatctgagagatctggaagac
aagatcgagcaaataaggaagcaactgactgccatgaacaatgttatacggaagattggt
acggtatacctaactgatgaagtagtcaggggttggattggggaagtgcgaaagctggcc
tatcgtgttgaggatgtaatggacaagtactcatatcacacacttcaattggaggaagaa
tggtttctgaagaagtttttcataaaaggatcacactatgtcttggtttttagtcaaatt
gcagatgaggtggtcaagatcgaaaaggagatcaagaatgttatagaacttaaagagcag
tggttgcagccatcacagcttgttcctgaccagtttattgagatggaaagacaacggtcg
caagacagcttccctctactcgtcaaagatgaagatcttgttgggattgaagataacagg
acaacactaaccaaatggctgtactctgatgagcttgacagcacggtgataaccatatca
ggtatgggcggacttggaaaaacgacccttgttacaaatgtttatgaacgtgaaaaaatc
aactttcctgctcctgcatggatggttgtgtcccagacctacactatggatgctctactt
aggaagttactcatgaaggttggtggtgaacagcagaatattgacaaattagatgtgcat
gatttgaaagaaaaaataaagcaaaagctcaaaaataggaaatgtttgattgtattggac
gatgtctgggaccaagaggtgtacattcaaatgtctgatgcattccaaaatctccaggca
agccgcatcattatcacgacaaggaagaatcatgtggctgctcttgctcacccaacacgt
caccttgatctccagcctctgagcaacattcatgcatttgatctcttctgcagaaggact
ttttataacaagaaggaccacacatgccccaatgaccttgtggaggttgctacttctata
gtagataggtgccagggattaccactagcaattgtatcaattgctagcctattatcttca
aggccacggacgtattacatttggaatcaaatgtacagtcagcttcgaagtgagctatca
aaaaatgatcatgtccgagcaattttgaacctgagctaccatgatctatcaggagacctc
agaaattgcttcttgtactgcagcctcttccctgaagattatccaatctcacgtgagagc
ttggtgaggctttgggttgcagaaggctttgtggtgagcaaagaaaacaatacatcggag
gaggtagctgagggaaacctcatggaactaatccaccgcaatatgctggtcacaatggaa
actgatgagcagggaagggtgagtacatgtacaatgcatgatattgtgcgagatcttgcc
cttgctgttgcaaaagatgagaggtttggcactgcaaataattatggagcaatgatactg
atggataacgataaggatgttcgacgcctatcatcttatggatggaaagacattgcatca
ctaaaagtaaaacttccacgtcttcgaactctagtgtcacttggaacaatttcatcctcc
ccagacatgttattgtcaattttgtgtgaatccagttacctaactgttctcgagctacaa
gattctgaaattactgaagtgccagcatctatagggactctgttcaacttacgttacatt
ggcttgcgccgtaccaaggtcaggtcactccctgattctgttgagaagctcttgaacctc
cagactctagacatcaagcaaacaaaaatagagagactgccacgagggatctctaagatt
aagaagctgcgacaccttttagctgacagatatgctgatgagaagcagtcgcaatttcgg
tacttcattggaatgcaagcacctaaagatctgtcgaacttggaagaactgcagactctt
gagactgtggaagccagcaaggatttggctcaacagctgaagaaactgatgcagctaagg
actgtgtggattgacaacatttgtgctcttgattgtgcaaatatatttgccgccctatca
aatatgccactactttccagcttgcttctttctgcaaaggatgaaaatgaggcactttgc
tttgatgctctcaaaccaatgtcgacagaacttcataggttgattatcagagggcaatgg
gctaagggaaccctgcagtgcccgatatttcaaggccatgggagacatctcaggtattta
gctctaagttggtgtgaacttggggaagatccactggagatgctcgcaccacacttgcca
aacctcacaaacctgagacttaacaacattcgtagtgcaaagactttggttcttcctgaa
ggatcatttccccaccttaagatgcttgtgttgaagcacatgcctaatgtcaaccagctg
gtgataggaaaaggcgccctcccttgcattgaaggtctgtacattgtgtccctggtggag
ctagataaggtccctcaaggcatcgaattgcttcgctccctgaagaagctctggctagtg
aacctgcacaggggctttctacctcagtggaacaagagcgagatgcaccataagatgcag
catgtcatagagattcgtgtttag
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