Panicum virgatum (switchgrass): 120644198
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Entry
120644198 CDS
T07260
Name
(RefSeq) transcription factor MYB44-like
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120644198
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120644198
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
DUF6581
Motif
Other DBs
NCBI-GeneID:
120644198
NCBI-ProteinID:
XP_039776694
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Position
8K:complement(21944286..21946881)
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AA seq
270 aa
AA seq
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MAFSSTTNTSDGARSSSCPRGHWRPGEDEKLKQLVKKYGPQNWNSISEKLEGRSGKSCRL
RWFNQLDPRINKRPFTEEEEERLLKAHHAHGNKWALIAHLFPGRTDNAVKNHWHVVMARR
SRERSRLHARAASSSHSSSPSSAYPFGTGLPATSSLCFGFSKLGGGGGLFSSPAASPPTS
LFKRFGTANGSKGLLGPNYEVARYSTYSGKQPAPPVSITFSTPREALSMDIGHHGRHEHR
QKDYHASDGEEALKRKDVPFIDFLGVGVSS
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atggcattctcatcgacaacgaacacatctgatggcgccagatcgtcatcatgcccgaga
ggccactggcggcctggggaggatgagaagcttaagcagctggtcaagaagtatgggccg
cagaactggaactccatttctgagaagctggaggggagatcaggcaagagctgccggctc
cggtggttcaaccagctggaccctcggatcaacaagcggccgttcacggaggaggaggag
gagcggctgctcaaggcccaccacgcccacggcaacaagtgggcgctcatcgcccacctc
ttccccggccgcacggacaatgccgtcaagaaccactggcacgtcgtcatggcgcgccgc
agccgcgagcgctccaggctccatgccagggccgcaagctcctcccattcctcctcgcca
tcctcggcgtatcccttcggcaccggcttgccggcgacgagctcgctctgcttcggcttc
tccaagctaggcggcggtggcggtttgttcagctcgccggcggcttctcctcccacgtca
ctgttcaagaggtttggcacagctaatggcagcaagggcttgctggggccgaattacgag
gtggcgaggtacagcacctacagcggcaagcaaccggcgcctcctgtgtccatcaccttc
tccactccaagagaagcgctgtctatggacatcggccaccatggccgccatgaacaccga
cagaaggattaccatgccagcgacggcgaagaggcactgaagaggaaggacgtgcccttc
atcgacttcctcggcgtcggtgtgtcctcataa
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