Panicum virgatum (switchgrass): 120644304
Help
Entry
120644304 CDS
T07260
Name
(RefSeq) SKP1-like protein 1
KO
K03094
S-phase kinase-associated protein 1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03083
Polycomb repressive complex
pvir04120
Ubiquitin mediated proteolysis
pvir04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120644304
04120 Ubiquitin mediated proteolysis
120644304
09126 Chromosome
03083 Polycomb repressive complex
120644304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120644304
04121 Ubiquitin system [BR:
pvir04121
]
120644304
03036 Chromosome and associated proteins [BR:
pvir03036
]
120644304
Membrane trafficking [BR:
pvir04131
]
Endosome - Lysosome transport
Acidification regulators
RAVE complex
120644304
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Adaptor protein
120644304
Cul7 complex
120644304
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
120644304
Centromeric chromatin formation proteins
Kinetochore proteins
CBF3 complex
120644304
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Skp1
Skp1_POZ
Motif
Other DBs
NCBI-GeneID:
120644304
NCBI-ProteinID:
XP_039776845
LinkDB
All DBs
Position
8K:26517006..26519004
Genome browser
AA seq
176 aa
AA seq
DB search
MAAEGDKKMITLKSSDGEEFEVEEAVAMESQTIRHMIEDDCADNGIPLPNVNSKILSKVI
EYCNKHVHAAAAAAAASKAGSDDAGAAVANSNAASGEDLKNWDADFVKVDQATLFDLILA
ANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEIRRENQWAFE
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgagggcgataagaagatgatcaccctcaagagctcggacggcgaggagttc
gaggtggaggaggcggtcgccatggagtcgcagaccatccgtcacatgatcgaggacgac
tgcgccgacaacggcatcccgctccccaacgtcaactccaagatcctctccaaggtaatc
gagtactgcaacaagcacgtccacgccgcggccgcagcggccgcggcgtccaaggccggc
tccgacgacgctggggcagccgtcgccaacagcaacgctgcctccggtgaagaccttaag
aactgggacgccgacttcgtcaaggtcgatcaggccacgctgttcgacctcatcttggct
gcaaactatctcaacatcaaggggctgctggacctgacgtgccagactgttgctgacatg
atcaagggcaagactcctgaggagatccgcaagaccttcaacatcaagaacgacttcacc
cctgaggaggaagaggagatccgcagagagaaccagtgggccttcgagtag
DBGET
integrated database retrieval system