Panicum virgatum (switchgrass): 120644454
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Entry
120644454 CDS
T07260
Name
(RefSeq) transport inhibitor response 1-like protein Os11g0515500 isoform X1
KO
K27740
protein auxin signaling F-box 2/3
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120644454
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Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_NXF1-5
F-box
Motif
Other DBs
NCBI-GeneID:
120644454
NCBI-ProteinID:
XP_039777016
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Position
8K:complement(33612198..33617542)
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AA seq
573 aa
AA seq
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MAYFPEEVVEQILGYVTSHRDRNATSLVSRAWYHIECSCRRSVLVSNCYAVRPERVLVRF
PSMRSLSVKGKPHFADFDLVPAGWGATADAWVDSCARACPGLEELRLKRMVVTDECLKLI
AGSFPNFKSLVLVSCEGFSTAGLATITTNCRFLKELDLQESVVKPRGHHWLNCFPKPSTE
LESLNFACLPGEVNASALERLVARSPNLKRLRLNCAVPFDVLYRILGRTPKLEDLGTGSF
VRGNNPAAYVSMFSAFGKCSSLKSLSGLWDATGFFLRGIFSVCKNLTCLNLSYAPLIQSA
DLINIIRRCMKLHVLWVLDHIGDEGLKVVGFSCPDLQELRVFPGNANTTTVTEEGLVAIS
SGCRKLQSVLYFCSRMTNAALITIAKNCPQLTSFRLCILELSSPDAMTGQPLDEGFGAIV
QSCKGLRRLSMSGLLTDCVFLYIGMYAEKLEMLSVAFAGGSDDGMVYVLNGCKNLKKLEI
RDSPFGDTALLAGVDRYEAMRLLWMSSCNITLGGCKTLAASMPGVNVEVINEAGASIDEA
DEESSNAKKVEKLYLYRTIAGPRGDAPGFVSIL
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggcatacttcccagaggaagtggtggagcagatccttggctatgtaacctcgcaccgg
gatcgcaatgccacgtcgctagtgtcccgggcatggtaccacattgagtgcagttgccgc
cgctcggtgcttgtaagcaactgctatgcagtgcgcccagagcgtgtgcttgtgcggttc
cccagcatgcgctcgctgagcgtgaagggcaaaccacactttgctgacttcgaccttgtc
ccggccgggtggggcgccacggctgatgcatgggtggattcgtgtgcccgtgcgtgccct
ggccttgaggagctccggctgaagcggatggttgtgactgatgagtgcctcaagctgatt
gctggctctttccccaactttaaatcacttgtccttgtcagctgcgaggggttcagcact
gctggccttgctactatcaccaccaattgcaggtttcttaaggaactggacttacaagag
agtgttgtgaaacctcgaggccatcattggcttaattgttttccaaagccttctacagaa
ctagaatccttgaactttgcttgcttgcctggggaggtgaatgcttctgcattggagaga
cttgttgcaaggagtccgaatcttaaaaggctaaggttgaattgtgctgttccatttgat
gttttgtacagaatacttggtcgcacacctaagctggaggatttaggtacaggatctttt
gtaagaggcaataaccctgctgcatatgtcagtatgttctctgcttttggaaagtgcagt
tcactaaagagtttatcaggtctttgggatgctacgggcttttttcttcgaggaattttt
tcagtctgcaagaaccttacatgcttgaacctcagctatgctccattgattcaaagtgcc
gatcttatcaatattattcgtcggtgtatgaaactccatgtcctatgggtgttagatcac
attggtgatgaaggattgaaggttgtgggcttttcttgtcctgatctccaagagttgagg
gtatttcctggtaatgcaaacacaactactgtgacagaggaagggttggttgccatatct
tcaggctgtcgaaagttacaatctgttctctacttttgcagtcgaatgaccaatgctgca
ctgattactattgcaaagaactgcccgcagttgacatccttcagactatgtattcttgag
ctcagttcaccagatgctatgacaggacagccactggatgaaggctttggtgcaatcgtc
cagtcatgcaaaggccttaggcgtctctccatgtctggcctcctcacagactgcgtgttc
ctgtatatcggcatgtatgccgagaagctggagatgctctccgtggcatttgcggggggt
agtgacgatggtatggtctacgtgcttaatggctgcaagaacctcaagaagctggagatc
agggacagccccttcggcgacaccgccctcctcgcaggagtggacaggtatgaggctatg
cgcttgctctggatgtcctcctgcaacatcaccttagggggctgcaagaccctcgcggcg
agcatgcctggtgtcaacgtggaggtcattaacgaggcgggagcgagtatcgacgaagcg
gatgaggaatccagcaacgcaaagaaggtggaaaagctgtatctctaccggacgatagcc
ggaccccggggtgatgcccccggattcgtctcaatattgtaa
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