Panicum virgatum (switchgrass): 120644569
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Entry
120644569 CDS
T07260
Name
(RefSeq) chalcone synthase C2-like
KO
K00660
chalcone synthase [EC:
2.3.1.74
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00941
Flavonoid biosynthesis
pvir00960
Tropane, piperidine and pyridine alkaloid biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir04712
Circadian rhythm - plant
Module
pvir_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00941 Flavonoid biosynthesis
120644569
00960 Tropane, piperidine and pyridine alkaloid biosynthesis
120644569
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
120644569
09180 Brite Hierarchies
09181 Protein families: metabolism
01008 Polyketide biosynthesis proteins [BR:
pvir01008
]
120644569
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.74 chalcone synthase
120644569
Polyketide biosynthesis proteins [BR:
pvir01008
]
Polyketide synthase (PKS)
Type III PKS
Plant type
120644569
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Gene cluster
GFIT
Motif
Pfam:
Chal_sti_synt_N
Chal_sti_synt_C
ACP_syn_III
FAE1_CUT1_RppA
ACP_syn_III_C
OpcA_G6PD_assem
Motif
Other DBs
NCBI-GeneID:
120644569
NCBI-ProteinID:
XP_039777144
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Position
8K:complement(38393973..38397407)
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AA seq
402 aa
AA seq
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MAGAAAAVTVEEVRKAQRASGPATVLAIGTATPANCVHQADYPDYYFRVTKSDHLTDLKE
KFKRMCDKSMIRKRYMHLTEEFLAENPNMCAYMAPSLDARQDIVVVEVPKLGKAAAQKAL
KEWGQPRSRITHLVFCTTSGVDMPGADYQLTKLLGLRPSVNRLMMYQQGCFAGGTVLRVA
KDLAENNRGARVLVVCSEITAVTFRGPSESHLDSLVGQALFGDGAAAVIVGADPDERAER
PLFQLVSAAQTLLPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERALEAAFAPLGISD
WNSIFWVAHPGGPAILDQVEAKVSLDKARMRATRHVLAEYGNMSSACVLFILDEMRKRSA
EDGCATTGEGLDWGVLFGFGPGLTVETVVLHSVPITAGAAAA
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggccggtgcggcggcggcggtgacggtggaggaggtgaggaaggcgcagcgcgcgtcg
ggtccggccaccgtgctggccatcgggacggcgacgccggccaactgcgtgcaccaggcc
gactacccggactactacttccgggtcaccaagagcgaccacctcaccgacctcaaggag
aagttcaagcggatgtgcgacaaatcgatgatccggaagcgctacatgcacctgacggag
gagttcctggcggagaaccccaacatgtgcgcctacatggcgccgtcgctggacgcgcgg
caggacatcgtggtggtggaggtgcccaagctcggcaaggcggcggcgcagaaggcgctc
aaggagtggggccagccgcggtcccgcatcacgcacctcgtcttctgcaccacctccggc
gtcgacatgcccggcgccgactaccagctcaccaagctgctgggcctgcgcccctccgtg
aaccgcctcatgatgtaccagcagggctgcttcgccggcggcacggtgctgcgcgtcgcc
aaggacctcgccgagaacaaccgcggcgcgcgggtgctggtggtgtgctccgagatcacc
gccgtcaccttccgggggccctccgagtcccacctcgactcgctggtggggcaggcgctg
ttcggcgacggcgccgccgcggtgatcgtcggcgccgaccccgacgagcgcgcggagcgg
ccgctgttccagctggtgtcggcggcgcagacgctgctgccggactcggagggcgccatc
gacgggcacctccgcgaggtcgggctcacgttccacctgctcaaggacgtgccggggctc
atctccaagaacatcgagcgcgcgctggaggcggcgttcgcgccgctgggcatctccgac
tggaactccatcttctgggtggcgcacccggggggcccggccatcctggaccaggtggag
gccaaggtgagcctggacaaggcccggatgcgcgccacccggcacgtcctcgccgagtac
ggcaacatgtccagcgcctgcgtgctcttcatcctcgacgagatgcgcaagcgctccgcc
gaggacggctgcgccaccaccggcgagggcctcgactggggcgtcctcttcggcttcggc
cccggcctcaccgtcgagaccgtcgtcctccacagcgtccccatcaccgccggcgccgcc
gccgcatga
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