Panicum virgatum (switchgrass): 120644615
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Entry
120644615 CDS
T07260
Name
(RefSeq) probable BOI-related E3 ubiquitin-protein ligase 3
KO
K19042
E3 ubiquitin-protein ligase BOI and related proteins [EC:
2.3.2.27
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120644615
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120644615
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120644615
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
120644615
NCBI-ProteinID:
XP_039777200
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All DBs
Position
8K:39544660..39546023
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AA seq
333 aa
AA seq
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MAVRAQFGGGLAGCLPLCGGAGLAEDQLLALRDFGGALLPEADKGYHYNCAAGVVSGAQS
ELTWNGGGGVALPSRKRGREDDALDQYVASSSAALLPIPGTIASRMVDSATASTSGRPAA
AAADALVAELLCRQGAEVDALVRAECEWLRAGLEEAGKRQRRALARAAAAGAARALRARE
AELGAARRRAAELEELLRQAAAEGQAWRGVARSNEAVAAGLRAALDALLLRGAGAAPAPA
AEEGFGESSDPAPAAAAADDALSRCVVEAEGAGAATSAPAASRWACRGCGGGEASVLLLP
CRHLCLCKACEPRAEACPVCLAPKSASIHVAAV
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgcgggcgcagttcgggggcggcctcgccgggtgcctgccgctctgcggcggc
gccgggctggcggaggaccagctgctggcgctcagggactttggtggcgcgctcctgcca
gaggccgacaaggggtaccactacaactgcgccgccggcgtggtcagcggcgcgcagagt
gagctgacatggaacggcggtggtggggtggcgttgccatcgcggaagcgcgggagggaa
gatgatgcgctcgaccagtacgtggcgtcctcgtcggcggcgctgctgccgatcccaggg
acgatcgcgagccgcatggtggactccgcgacggcgtcgacgagcgggcggccggccgcg
gcggcggcggacgcgctggtggcggagctcctgtgccggcagggcgcggaggtggacgcg
ctggtgcgcgccgagtgcgagtggctgcgcgcggggctggaggaggccgggaagcggcag
cgccgggcgctggcgcgcgccgccgcggccggcgcggcgcgcgcgctgcgggcgcgggag
gccgagctgggcgccgcgcggcggcgcgcggcggagctcgaggagctgctgcggcaggcg
gccgccgagggccaggcgtggcgcggcgtggcccgcagcaacgaggccgtcgccgcgggg
ctccgcgccgcgctcgacgcgctcctcctccgcggcgccggtgccgccccggcgccggcc
gccgaggagggcttcggcgagtcctccgaccccgcccctgccgccgcggcggcggacgac
gcgctgtcccgatgcgtcgtggaggccgagggcgcgggcgcggccacgtcggcccctgcg
gcgagcaggtgggcgtgccgggggtgcggcggcggcgaggcgtcggtgctgctgctgccg
tgccggcatctgtgcctgtgcaaggcgtgcgagccccgggcggaagcctgccccgtctgc
ctggcgcccaagagcgcgtccatccacgtcgccgccgtctga
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