Panicum virgatum (switchgrass): 120644672
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Entry
120644672 CDS
T07260
Name
(RefSeq) nicotianamine aminotransferase 1-like
KO
K00815
tyrosine aminotransferase [EC:
2.6.1.5
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00130
Ubiquinone and other terpenoid-quinone biosynthesis
pvir00270
Cysteine and methionine metabolism
pvir00350
Tyrosine metabolism
pvir00360
Phenylalanine metabolism
pvir00400
Phenylalanine, tyrosine and tryptophan biosynthesis
pvir00950
Isoquinoline alkaloid biosynthesis
pvir00960
Tropane, piperidine and pyridine alkaloid biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00034
Methionine salvage pathway
pvir_M00044
Tyrosine degradation, tyrosine => homogentisate
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
120644672
00350 Tyrosine metabolism
120644672
00360 Phenylalanine metabolism
120644672
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
120644672
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
120644672
09110 Biosynthesis of other secondary metabolites
00950 Isoquinoline alkaloid biosynthesis
120644672
00960 Tropane, piperidine and pyridine alkaloid biosynthesis
120644672
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pvir01007
]
120644672
Enzymes [BR:
pvir01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.5 tyrosine transaminase
120644672
Amino acid related enzymes [BR:
pvir01007
]
Aminotransferase (transaminase)
Class I
120644672
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GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Aminotran_3
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-GeneID:
120644672
NCBI-ProteinID:
XP_039777287
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All DBs
Position
8K:complement(40685280..40688212)
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AA seq
430 aa
AA seq
DB search
MENGAGNGVAVAAAEAWNFAPNEALLGLTALSVRGVLGRVKAGMVAGGGGARPVVPMGHG
DPSAFPCFRTAPEAVDAVAGALRSGEHNSYPTSVGLEPARRSIAKYLSRDLPYELSPDDI
YLTSGCTQAIEIICSVLARPGANILLPRPGYLFYEARAAFNGMEARYFDLLPEKDWEVDI
DCVQALADKNTIAMVIVNPGNPCGNVYSYEHLAKVAETAQKLGIFVITDEVYAHLTFGER
KFVPMGVFGTVVPVFTLGSISKRWVVPGWRLGWIVTNDPNGVFKRTKVVDCIKSYLDISS
DPPTFVQGAIPKLLENTKVEFFNRTVKILRETADICWEKLKGINSITCPSKPEGSMFVMV
KLDLSCLQDIKDDMDFCCRLAKEELVVLLPGCAVGYKNWLRITFAIDPSSLEDGLDRLKS
FCLRHSKPAK
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggagaacggcgccggcaacggggtggccgtggcggcggcggaggcctggaacttcgcg
ccgaacgaggccctcctgggcctgacggcgctctcggtgcgcggcgtgctgggcagggtg
aaggccgggatggtggccggcggcggcggggcccggccggtggtcccgatgggccacggc
gacccgtcggcgttcccgtgcttccgcaccgcaccggaggccgtggacgccgtcgccggc
gctctccggtccggggagcacaactcctaccccaccagcgttggccttgagcccgcacgg
aggtccatcgcgaagtacttatcccgtgatctgccatatgaattatcaccagatgacatc
tacctgacaagcggctgtactcaagcaattgagataatctgctctgttttagctcgtcct
ggtgccaacatcttgcttccaaggcctggctacctgttctatgaggcgcgtgctgctttc
aatggcatggaagctcggtattttgatcttctacctgagaaggattgggaggttgatatt
gattgcgtccaagctcttgccgacaagaacaccattgccatggtcattgtcaacccagga
aacccttgtggcaatgtctactcctatgagcacctagccaaggttgccgagaccgcgcag
aagcttggcatatttgtaatcacagatgaggtgtatgcacacttgacatttggggagagg
aaatttgtacccatgggtgtgtttgggacagtggttcctgtgttcacactagggtcgata
tcaaagagatgggtggtacctggatggcggcttggttggattgttaccaatgatcctaat
ggtgtatttaagaggaccaaggttgttgactgtatcaaaagctaccttgatatctcctct
gatcctccaacatttgtccagggagcaattccaaaactcctggagaacacaaaggtggaa
ttcttcaacagaactgttaaaattcttagagaaactgcagatatatgctgggagaaactg
aagggcatcaattccatcacatgcccgagcaaacctgagggatccatgtttgtaatggtg
aaattggacctatcctgcctgcaagacatcaaagatgacatggacttctgctgccggctg
gcaaaggaagaattagtggttcttcttccaggatgtgctgtgggatacaagaattggctc
cgaatcaccttcgcaattgatccatcttctctagaagacggccttgacaggctcaagtcc
ttctgcttgcgacacagcaagccggcaaagtga
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