Panicum virgatum (switchgrass): 120644681
Help
Entry
120644681 CDS
T07260
Name
(RefSeq) THUMP domain-containing protein 1 homolog
KO
K06963
tRNA acetyltransferase TAN1
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvir03016
]
120644681
Transfer RNA biogenesis [BR:
pvir03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
120644681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THUMP
Motif
Other DBs
NCBI-GeneID:
120644681
NCBI-ProteinID:
XP_039777294
LinkDB
All DBs
Position
8K:complement(40887897..40892971)
Genome browser
AA seq
383 aa
AA seq
DB search
MAPGGDGKANPGGGAKGGGRKRKFLPHGKPVRKGAYPLRPGVQGFFITCDGGRERQATRE
ALSLLDSFYEDLVDGKGSDDKPKGIPDKPLNKKIKFEDSDSSDDEDEDHSGEEADNGNGN
DVEKGETAPAEQQQEVLNTSVPGSKDGVEQASTAEEPKEKKQRVEDPPVSEQPEQKEAAD
ELKESTDKPKESTDKPKDSGERNIDDLIDEDLKELGDRKKRLFASLESGCNGCIFIQMHK
RAGDPGPVEIVQNIMSSAASTRKHMSRFILRVLPAEVACYASEEEISKAISPLVEKYFPK
ECPTSHKFAVLYEARSNTGIDRMKIINAVAKSVPQPHKVDLKNPDKTIIVQIAKTICMIG
VVERYKELAKFNLRQLTSSESEK
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggcccccggcggcgatggcaaggcgaacccgggcggcggcgccaagggtggtgggagg
aagcgcaagttcctcccccacgggaagccggtgcggaagggggcgtacccgctgcgcccc
ggcgtgcagggcttcttcatcacctgcgacggcggccgcgagcgccaggccacccgcgag
gctctctccctcctcgactccttctacgaagatctggtggatgggaaaggatcggatgac
aaacccaaaggcattcctgacaagccactgaacaaaaagataaagtttgaggactctgat
tcctcagatgatgaggatgaagaccattccggtgaggaagctgacaatgggaatgggaat
gatgtggagaaaggtgaaactgctccagccgagcagcaacaggaggtacttaacacctct
gttcctggcagtaaggatggtgtggaacaagcaagcaccgctgaagaaccaaaagaaaag
aagcaacgtgtggaagaccctccagtttctgaacagccagaacaaaaggaggctgctgat
gaattaaaggagtccactgataaaccaaaagagtccactgataaaccaaaagattccggt
gaaaggaacattgatgatttaattgatgaggacttgaaagaacttggagacaggaaaaag
aggctctttgcaagccttgagtcaggctgcaatggttgcatattcattcaaatgcataaa
agagcaggagaccctggtccagttgagattgtacaaaacattatgtcatcggctgcttca
actcgtaaacatatgtcaagatttattctgcgagttttgcctgctgaggttgcatgctat
gcatctgaagaggaaatatcaaaagcaattagcccccttgttgaaaagtacttcccaaaa
gaatgtcctacgagtcataagtttgcagttttatatgaagcaaggtcaaacacaggaatt
gatagaatgaaaattataaatgcagtagcgaaatctgtaccgcaacctcacaaagttgac
ctgaaaaatccggacaaaactattattgtccagattgcaaagaccatatgcatgatcgga
gttgtcgaaagatacaaagagctcgcaaagttcaacctaaggcagctgacctcatcagag
tcggagaagtag
DBGET
integrated database retrieval system
