Panicum virgatum (switchgrass): 120644688
Help
Entry
120644688 CDS
T07260
Name
(RefSeq) long chain acyl-CoA synthetase 2-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00061
Fatty acid biosynthesis
pvir00071
Fatty acid degradation
pvir01100
Metabolic pathways
pvir01212
Fatty acid metabolism
pvir04146
Peroxisome
Module
pvir_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
120644688
00071 Fatty acid degradation
120644688
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
120644688
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pvir01004
]
120644688
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120644688
Enzymes [BR:
pvir01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
120644688
Lipid biosynthesis proteins [BR:
pvir01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
120644688
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of breast milk
120644688
Exosomal proteins of breast cancer cells
120644688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
120644688
NCBI-ProteinID:
XP_039777301
LinkDB
All DBs
Position
8K:complement(41016734..41021686)
Genome browser
AA seq
662 aa
AA seq
DB search
MAEMFTVKVGEATPAAGGRPAAGPVYRSVYAKDGLMELPPDVQSPWDFFSGAVKKYPKNR
MLGQRQVTDGKAGEYVWQTYEEVYQKVMRIGTAIRSLDVNPGAHCGIYGSNCPEWVMAMQ
ACNSQGICYVPLYDTLGANAVEFIMDHAEISIAFVQESKIKSILAVVPKCTAHLRAIVSF
GYFTTEMKKEAEKFGVSCFSWEEFSSMEKQNYEYPKKQKDDICTIMYTSGTTGDPKGVII
TNRAIIAGVMTTEHLLKETDKVITEEDSYFSYLPLAHIFDQVIENYCISKGASIGFWQGD
IRYLMEDVQVMKPTIFCGVPRVYDRIYTGINLKIQSGGMLAKHLFQYAYNYKLANMRKGL
KQHEASPFFDKIVFSKIKEGLGGRIRLMIAGAAPLPGQIEEFMRVTSCSVFVQGYGLTES
CAGCFTSIANVFSMIGTVGPPVTTIEARLESVPEMGYDALSETPRGEICLRGHTLFSGYY
KRPSLTEEVFSDGWFHTGDIGEWQPNGAMKIIDRKKNIFKLSQGEYVAVEVVESAYMQSP
LVASVWVYGNSFESFLVAVVVPERQALEEWVATNKKAGDFAELCNDPKARGYIQDELNKT
GKKLGLRGFEMLKAVHLEPVPFSIEKDLITPTFKLKRPQLLKYYKKCIDQMYKDAKDGRT
AL
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggcggagatgttcaccgtgaaggtgggggaggcgacgccggccgccggcggcaggccg
gcggccgggcccgtctaccggagcgtgtacgccaaggacggcctcatggagctgccgccg
gacgtccagtccccctgggacttcttcagtggagcagtcaagaagtaccccaagaacagg
atgctcggccagcgtcaagtcacagatggcaaggccggtgagtatgtgtggcaaacgtat
gaggaagtgtaccagaaggtcatgaggattggaacagcaatcagaagcctcgatgtgaac
ccgggggctcactgtggcatatatggttccaactgtccagaatgggttatggccatgcag
gcatgcaacagtcaaggaatatgttatgtcccactgtatgacaccctcggagcaaatgct
gttgaattcatcatggaccatgctgagatatccattgcttttgtccaggagagcaagatc
aaatcaatactagccgtagtccctaagtgcacagcacaccttagagcgattgttagtttt
ggatattttacaactgagatgaaaaaggaagctgagaaatttggtgtatcttgcttttct
tgggaagaattttcttcaatggaaaaacaaaactacgaatatcccaagaaacaaaaggat
gatatttgtacaatcatgtataccagtggaacaactggagatcccaaaggtgtgataatc
acaaacagggctatcattgctggtgtcatgaccacggaacacctactcaaagagacagat
aaagtgatcactgaagaggattcgtatttctcctaccttccattagcacacatatttgat
caagtaattgagaactactgtatctctaaaggagcttccattggattctggcaaggggac
attaggtatctgatggaggatgtgcaagtgatgaaaccgacaatattttgtggtgttcct
cgtgtttatgatcgtatatacacaggtataaatctgaaaattcagtctggagggatgttg
gccaaacacctttttcagtatgcctacaactacaaacttgccaatatgaggaaagggctg
aagcagcatgaagcatcaccatttttcgacaagatagttttcagcaaaataaaggagggg
cttggaggacgtatccgtctcatgatagcaggggcagcacctttgccagggcaaatcgaa
gagttcatgcgggtaaccagctgcagcgtctttgtacaaggatatgggctcactgagagt
tgtgcgggatgcttcacatcaatcgccaatgttttctcaatgattggaacagttggccct
cctgtaacgacgatcgaagcgcgactagagtctgtccctgaaatgggctatgatgctctg
tcagaaacgccccggggtgagatctgcttgaggggtcataccttgttctctgggtactac
aagcgccctagcctcactgaagaagtgttctcagatggctggttccatacaggtgatatt
ggagagtggcaacccaatggcgcgatgaagatcattgacaggaagaagaacatcttcaag
ttatcccagggagagtatgtagcagttgaggtcgtggaaagtgcatacatgcagtcccct
cttgtggcttcggtttgggtatatgggaacagctttgagtcatttcttgttgctgtggtt
gtccctgagaggcaagctcttgaggaatgggtagcaaccaacaagaaggctggtgatttt
gcagagctgtgtaatgatccaaaagcaaggggttacattcaggatgagctgaacaaaact
ggcaagaaactcgggttgagaggctttgagatgctgaaggcagttcacctggagccggta
ccattcagcatagagaaggatctgatcactccaacttttaagcttaagagaccccagctg
ctcaaatattacaagaaatgcattgatcagatgtacaaggatgccaaggacgggagaact
gcactgtga
DBGET
integrated database retrieval system
